Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- mitochondrion 1
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45560 | Soybean | nucleus | 36.03 | 40.38 |
| KRH74501 | Soybean | nucleus | 65.66 | 40.21 |
| KRG99455 | Soybean | nucleus | 33.67 | 38.46 |
| KRH62217 | Soybean | cytosol, nucleus | 24.24 | 29.27 |
| KRH72458 | Soybean | nucleus | 24.58 | 20.98 |
| PGSC0003DMT400092251 | Potato | cytosol | 23.91 | 19.67 |
| KRH16845 | Soybean | nucleus | 23.57 | 19.23 |
| KRH42098 | Soybean | nucleus | 28.96 | 18.9 |
| Solyc11g010540.1.1 | Tomato | cytosol | 23.57 | 18.72 |
| KRH49811 | Soybean | nucleus | 28.28 | 17.83 |
| KRH10601 | Soybean | nucleus | 26.94 | 16.1 |
| KRG89389 | Soybean | extracellular | 8.08 | 16.0 |
| KRH21766 | Soybean | nucleus | 25.25 | 15.03 |
| PGSC0003DMT400041631 | Potato | cytosol, mitochondrion, nucleus, plastid | 15.82 | 13.78 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EMBL:ACUP02000727 | InterPro:DnaJ_domain | EnsemblPlantsGene:GLYMA_02G041200 | UniProt:I1JC99 |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | EnsemblPlants:KRH69663 | ProteinID:KRH69663 | ProteinID:KRH69663.1 |
| PFAM:PF00226 | PFscan:PS50076 | PANTHER:PTHR45496 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI00023BE488 |
Description
hypothetical protein
Coordinates
chr2:-:3864809..3865702
Molecular Weight (calculated)
33506.2 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.645
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLRGSEPE NPTATCLSML SLRRFSACRD FARRLPPSDF VARVLAVADV LSASDFYSVL QLRPSDGGNR DLARRQYAKL ALLLDPTNPD KLPFSDEALA
101: RVQEAWHVLS HPERRTRHDR EQNANANPRR TTTSFWTACP YCWNLFEYEK RYEDCALLCQ VCGKAFQGVP VKPPTKTGDA VVEGEELRQY YSCEASVPLM
201: YYEVKGNNGL GGQNIAQFVY ISDDDNDDGG FVKNEGLQQG IREKRRMRVK TVANKVAGNR RRRPIDGGDS DFDLDVEDGE LEFTEGDDDA FVGLKFD
101: RVQEAWHVLS HPERRTRHDR EQNANANPRR TTTSFWTACP YCWNLFEYEK RYEDCALLCQ VCGKAFQGVP VKPPTKTGDA VVEGEELRQY YSCEASVPLM
201: YYEVKGNNGL GGQNIAQFVY ISDDDNDDGG FVKNEGLQQG IREKRRMRVK TVANKVAGNR RRRPIDGGDS DFDLDVEDGE LEFTEGDDDA FVGLKFD
001: MVSDGGGENN RAEADQLLAT SEKLLASSDF HGAKTFAIRA CEADPSRTDA ADYILAIADT LLAGETTIGD SKVPDWYAVL RISRLTQSPE HVATQYRRLT
101: LLLKLNINRL PFADQALKLV SDAWYVLSDP PRKSIYDREL QLSQTGQSEK FQDSPLQSQA ETLENPTATS FWTACPYCFS LFEYPKGYEE CTLRCQQCRK
201: AFEAVKTQTP PVESNGEGVY FGSWAMFPVG LTSHPNTSNW SPISHLSVCT GQSSSDQQSN LKATPRNDDV DIYIAISDDD
101: LLLKLNINRL PFADQALKLV SDAWYVLSDP PRKSIYDREL QLSQTGQSEK FQDSPLQSQA ETLENPTATS FWTACPYCFS LFEYPKGYEE CTLRCQQCRK
201: AFEAVKTQTP PVESNGEGVY FGSWAMFPVG LTSHPNTSNW SPISHLSVCT GQSSSDQQSN LKATPRNDDV DIYIAISDDD
Arabidopsis Description
At5g09540 [Source:UniProtKB/TrEMBL;Acc:Q9LXB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.