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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH28566 Soybean nucleus 89.54 92.46
KRH69981 Soybean nucleus 74.06 73.96
KRH08338 Soybean nucleus 73.32 73.13
VIT_04s0023g00980.t01 Wine grape nucleus 64.88 63.81
Solyc02g089970.2.1 Tomato nucleus 57.31 56.66
CDY39668 Canola nucleus 48.32 52.78
Bra032148.1-P Field mustard nucleus 48.12 52.56
CDY62521 Canola nucleus 48.06 52.49
AT2G23740.2 Thale cress nucleus 48.26 52.1
CDY46064 Canola nucleus 16.02 48.58
Bra039210.1-P Field mustard plastid 9.58 46.73
Os02t0708600-01 Rice nucleus 17.43 46.18
GSMUA_Achr5P08820_001 Banana cytosol 7.1 44.73
GSMUA_Achr5P08830_001 Banana nucleus 33.45 43.93
Zm00001d044165_P001 Maize nucleus 7.64 37.5
KXG30908 Sorghum nucleus 39.81 37.31
HORVU6Hr1G069350.6 Barley nucleus 40.08 36.89
TraesCS6A01G274600.1 Wheat nucleus 40.28 36.83
TraesCS6B01G302100.2 Wheat nucleus 40.01 36.81
TraesCS6D01G254900.2 Wheat nucleus 39.81 36.78
Zm00001d017798_P002 Maize nucleus 35.86 35.83
Zm00001d051590_P001 Maize nucleus 35.32 34.99
Os02t0708500-01 Rice cytosol 8.04 27.52
KRH76344 Soybean nucleus 5.9 26.59
KRG94709 Soybean nucleus 5.36 26.58
KRG91550 Soybean nucleus 5.43 23.48
KRG90121 Soybean nucleus 8.38 22.64
KRH39353 Soybean nucleus 6.03 22.39
KRH56252 Soybean nucleus 3.15 22.07
KRH66648 Soybean nucleus 10.05 21.19
KRH35283 Soybean nucleus 2.01 20.98
KRH20576 Soybean nucleus 9.12 20.21
KRH13229 Soybean nucleus 9.05 20.06
KRH34133 Soybean nucleus 9.18 19.97
KRH62706 Soybean nucleus 8.85 19.79
KRG92731 Soybean nucleus 9.25 19.35
KRH68776 Soybean nucleus 8.65 19.05
KRG95723 Soybean nucleus 9.12 18.78
KRH20251 Soybean nucleus, plastid 8.31 18.73
KRH67447 Soybean nucleus 8.98 18.48
KRH32246 Soybean nucleus 9.99 18.15
KRH19618 Soybean nucleus 9.79 17.76
KRH06819 Soybean nucleus 8.31 17.22
KRH49479 Soybean nucleus 7.71 16.22
KRG89164 Soybean nucleus 7.51 15.64
KRG97025 Soybean nucleus 2.88 15.14
KRG95012 Soybean plastid 4.76 14.55
KRH77297 Soybean nucleus 10.52 14.52
KRH28192 Soybean nucleus 10.39 14.01
KRH07636 Soybean nucleus 5.29 13.74
KRH77260 Soybean nucleus 3.95 12.12
KRH28232 Soybean nucleus 3.49 10.63
KRH67444 Soybean cytosol 0.0 0.0
Protein Annotations
KEGG:00310+2.1.1.43EntrezGene:100786757MapMan:12.3.3.7Gene3D:2.170.270.10Gene3D:3.30.160.60EMBL:ACUP02000645
EnsemblPlantsGene:GLYMA_01G180100GO:GO:0003674GO:GO:0003676GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005694GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008270GO:GO:0009987GO:GO:0016043
GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0032259GO:GO:0034968InterPro:IPR001214
InterPro:IPR003616InterPro:IPR007728InterPro:IPR013087UniProt:K7K4I0EnsemblPlants:KRH76897ProteinID:KRH76897
ProteinID:KRH76897.1ProteinID:KRH76898.1ProteinID:KRH76899.1PFAM:PF00856PFAM:PF05033ScanProsite:PS00028
PFscan:PS50157PFscan:PS50280PFscan:PS50867PFscan:PS50868PANTHER:PTHR22884PANTHER:PTHR22884:SF296
InterPro:Post-SET_domInterPro:Pre-SET_domInterPro:SET_domSMART:SM00317SMART:SM00355SMART:SM00468
SUPFAM:SSF82199UniParc:UPI00023376C0InterPro:Znf_C2H2_typeSEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:51631935..51646125
Molecular Weight (calculated)
168907.0 Da
IEP (calculated)
6.866
GRAVY (calculated)
-0.483
Length
1492 amino acids
Sequence
(BLAST)
0001: MEVLPCSGVQ YAGESDCPQQ SSGTAFVYQE QPNCPENGEH VNFVAAQLNE SSHKMQGPQI ERHLSTNSDC QCIGTSCCDC QVDDQHEYCG FHDFEEDMIN
0101: EPCLTSENFI SVVDTIEIES PNNSREGDLS CSEPKWLEGD ESVALWVKWR GKWQAGIRCA RADWPLSTLK AKPTHDRKKY FVIFFPHTRI YSWANMLLVR
0201: SINEYPHPIA YKTHQVGLKM VKDLTVARRF IMQKLVVGLL NMVDQFHFNA LTETARDVKV WKEFAMEASR CKGYSNFGRI LLKLHKSILQ HHINADWLQH
0301: SYLSWAERCQ SSNSAESVEL LKEELFDSIL WNGVNTLWDA VAPMQSTLGS EWKTWKQDVM KWFSAPPSLS SSKDTQQQSS DDLYQANLQV CRKRPKLEVR
0401: RADTHASQVE IKDQTIALEA DPGFFKNQDT LSTIAAQSCK QEGVREVSMT TSPSNLANKW NEIVVEATAS DFLHIKEMES TPTNEMSVAK SVEPGSKNRQ
0501: CIAYIEAKGR QCVRWANDGD VYCCVHLSSR FLGSSTKSEK PVPVDTPMCE GTTVLGTRCK HRALPDSLFC KKHRPHAETV QTSNLPQNTL KRKHEENYTG
0601: SKDMYALVNV ESPLQVDPVS SIGGDSVHVE SNFNEKPKHS ENDHNAVVSM HCIGSPPYDY KNPCREGPKR YCLYCERHLP SWLKRARNGK SRIVSKEVFT
0701: ELLGECSSWE QKVHLHKACE LFYRLFKSIL SLRNPVPKDV QFQWALTEAS KDSNVGEFFT KLVHSEKARI KSIWGFNDDM DISSIMEEPP LLPSTINDNY
0801: DEENAIKCKI CSAEFPDDQA LGNHWMDSHK KEAQWLFRGY ACAICLDSFT NKKLLETHVQ ERHHVQFVEQ CMLLQCIPCG SHFGNTEQLW QHVLLVHPVD
0901: FKPSTAPKQQ NFSTGEDSPV KHDQGNLAPL ENNSENTGGL RKFVCRFCGL KFDLLPDLGR HHQAAHMGPN LASSRPAKRG VRYYAYRLKS GRLSRPKFKK
1001: TLAAASYRLR NKANANLKRG IQASNSLGMG GITIQPHVTE SETTNIGRLA EHQCSAVSKI LFSEIQKMKP RPNNLDILSI AQSACCKVSL AASLEEKYGI
1101: LPEKLYLKAA KLCSENSILV NWHQEGFICP RACNVSKDQA LLSPLASLPN SSVRPKSVNL SDPASDEWEV DEFHCIINSH TLKIGSLPKA VILYDDISFG
1201: KESVPVSCVV DQELMHSLHM NGCNRQNISP SMPWETFTYV TKPMLDQSLS LDSESLQLGC ACLCSTCCPE TCDHVYLFGN DYDDAKDIFG KPMRGRFPYD
1301: ENGRIILEEG YLVYECNHMC RCNKSCPNRV LQNGVRVKLE VFKTEKKGWA VRAGEAILRG TFVCEYIGEV LDVQEARDRR KRYGAEHCSY LYDIDARVND
1401: MGRLIEEQAQ YVIDATKFGN VSRFINHSCS PNLVNHQVLV ESMDCERAHI GFYASRDIAL GEELTYDYQY ELMPGEGSPC LCESLKCRGR LY
Best Arabidopsis Sequence Match ( AT2G23740.1 )
(BLAST)
0001: MEVKMDELVL DVDVEEATGS ELLVKSEPEA DLNAVKSSTD LVTVTGPIGK NGEGESSPSE PKWLQQDEPI ALWVKWRGKW QAGIRCAKAD WPLTTLRGKP
0101: THDRKKYCVI FFPHTKNYSW ADMQLVRSIN EFPDPIAYKS HKIGLKLVKD LTAARRYIMR KLTVGMFNIV DQFPSEVVSE AARDIIIWKE FAMEATRSTS
0201: YHDLGIMLVK LHSMILQRYM DPIWLENSFP LWVQKCNNAV NAESIELLNE WNEVKSLSES PMQPMLLSEW KTWKHDIAKW FSISRRGVGE IAQPDSKSVF
0301: NSDVQASRKR PKLEIRRAET TNATHMESDT SPQGLSAIDS EFFSSRGNTN SPETMKEENP VMNTPENGLD LWDGIVVEAG GSQFMKTKET NGLSHPQDQH
0401: INESVLKKPF GSGNKSQQCI AFIESKGRQC VRWANEGDVY CCVHLASRFT TKSMKNEGSP AVEAPMCGGV TVLGTKCKHR SLPGFLYCKK HRPHTGMVKP
0501: DDSSSFLVKR KVSEIMSTLE TNQCQDLVPF GEPEGPSFEK QEPHGATSFT EMFEHCSQED NLCIGSCSEN SYISCSEFST KHSLYCEQHL PNWLKRARNG
0601: KSRIISKEVF VDLLRGCLSR EEKLALHQAC DIFYKLFKSV LSLRNSVPME VQIDWAKTEA SRNADAGVGE FLMKLVSNER ERLTRIWGFA TGADEEDVSL
0701: SEYPNRLLAI TNTCDDDDDK EKWSFSGFAC AICLDSFVRR KLLEIHVEER HHVQFAEKCM LLQCIPCGSH FGDKEQLLVH VQAVHPSECK SLTVASECNL
0801: TNGEFSQKPE AGSSQIVVSQ NNENTSGVHK FVCKFCGLKF NLLPDLGRHH QAEHMGPSLV GSRGPKKGIR FNTYRMKSGR LSRPNKFKKS LGAVSYRIRN
0901: RAGVNMKRRM QGSKSLGTEG NTEAGVSPPL DDSRNFDGVT DAHCSVVSDI LLSKVQKAKH RPNNLDILSA ARSACCRVSV ETSLEAKFGD LPDRIYLKAA
1001: KLCGEQGVQV QWHQEGYICS NGCKPVKDPN LLHPLIPRQE NDRFGIAVDA GQHSNIELEV DECHCIMEAH HFSKRPFGNT AVLCKDISFG KESVPICVVD
1101: DDLWNSEKPY EMPWECFTYV TNSILHPSMD LVKENLQLRC SCRSSVCSPV TCDHVYLFGN DFEDARDIYG KSMRCRFPYD GKQRIILEEG YPVYECNKFC
1201: GCSRTCQNRV LQNGIRAKLE VFRTESKGWG LRACEHILRG TFVCEYIGEV LDQQEANKRR NQYGNGDCSY ILDIDANIND IGRLMEEELD YAIDATTHGN
1301: ISRFINHSCS PNLVNHQVIV ESMESPLAHI GLYASMDIAA GEEITRDYGR RPVPSEQENE HPCHCKATNC RGLLS
Arabidopsis Description
SUVR5Histone-lysine N-methyltransferase SUVR5 [Source:UniProtKB/Swiss-Prot;Acc:O64827]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.