Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28473 | Soybean | nucleus | 93.75 | 93.07 |
| VIT_07s0031g00640.t01 | Wine grape | nucleus | 76.29 | 75.18 |
| PGSC0003DMT400010353 | Potato | nucleus | 72.06 | 69.88 |
| Solyc02g090850.2.1 | Tomato | nucleus | 72.06 | 69.88 |
| GSMUA_Achr6P10170_001 | Banana | nucleus | 67.65 | 68.4 |
| CDX75625 | Canola | nucleus | 68.38 | 68.01 |
| Bra011736.1-P | Field mustard | nucleus | 68.2 | 67.95 |
| AT4G36980.4 | Thale cress | nucleus | 68.75 | 67.27 |
| Os03t0395900-02 | Rice | nucleus | 65.26 | 66.86 |
| TraesCS4D01G149700.1 | Wheat | nucleus | 62.5 | 64.15 |
| TraesCS4A01G149000.1 | Wheat | nucleus | 62.5 | 64.03 |
| HORVU4Hr1G039020.13 | Barley | nucleus | 61.58 | 63.45 |
| GSMUA_Achr10P... | Banana | nucleus | 57.54 | 62.73 |
| TraesCS4B01G164500.1 | Wheat | nucleus | 63.24 | 62.43 |
| Zm00001d029426_P024 | Maize | nucleus | 63.79 | 58.91 |
| CDX69275 | Canola | nucleus | 63.24 | 58.8 |
| OQU92461 | Sorghum | nucleus | 65.62 | 55.43 |
Protein Annotations
| EMBL:ACUP02000650 | EnsemblPlants:KRH77000 | EnsemblPlantsGene:GLYMA_01G186000 | EntrezGene:100792600 | InterPro:SWAP_N_domain | ncoils:Coil |
| PANTHER:PTHR13161 | PANTHER:PTHR13161:SF4 | PFAM:PF09750 | ProteinID:KRH77000 | ProteinID:KRH77000.1 | SEG:seg |
| SMART:SM01141 | UniParc:UPI0002336FD6 | UniProt:I1J967 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:+:52128387..52133252
Molecular Weight (calculated)
63004.0 Da
IEP (calculated)
10.382
GRAVY (calculated)
-1.401
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MWHEARRSEK KVHDMMDAAR KRAQRRAVYL AKRRGDPQQS IQLVGFRSRT YRDDALYQAT QDQQGLIPWN GKQDVLIDRF DGRALLDFIR DSSHRRVPEK
101: SEEEEELEEF VNFERYRDLI KHRRRGFSDE EALQHVNQEM EAKAAAPFTS DRSNLSQPAA SKGSYSQVGF SYDGNGKEET HISDDDDNDN EEEEDDEDDE
201: DFNSDDSNDE GMEIIAKEYG VKRYGWLVYM DKKAKEEEKR QKELIKGDPA IRKLSRKERR KASQIERERE REATRISGTR VLHHDPYRET RQSPTYEAYS
301: RSRRSRSPLR SYSPSHSRRY SRSGHSDDIH RSKPRTPKIE YITEFGGSGA ADERRPEGFS PPRSPTSQVD LLNRPTSGCI LEALHVDPAS GVSIDKDKGT
401: KVLKPSVSGS SSALAKLKAG GSGGPLKQGE KKETPQERLK RIMNKQLNKQ IKKDTAAELA KKREQERQRQ EKLAETSRLS RYRCRSRSRS FSGSPPRRYR
501: RSRSPSRSRS SRRYYSSSHS RSPSRTRSPS PYSRSPRIRN RSKH
101: SEEEEELEEF VNFERYRDLI KHRRRGFSDE EALQHVNQEM EAKAAAPFTS DRSNLSQPAA SKGSYSQVGF SYDGNGKEET HISDDDDNDN EEEEDDEDDE
201: DFNSDDSNDE GMEIIAKEYG VKRYGWLVYM DKKAKEEEKR QKELIKGDPA IRKLSRKERR KASQIERERE REATRISGTR VLHHDPYRET RQSPTYEAYS
301: RSRRSRSPLR SYSPSHSRRY SRSGHSDDIH RSKPRTPKIE YITEFGGSGA ADERRPEGFS PPRSPTSQVD LLNRPTSGCI LEALHVDPAS GVSIDKDKGT
401: KVLKPSVSGS SSALAKLKAG GSGGPLKQGE KKETPQERLK RIMNKQLNKQ IKKDTAAELA KKREQERQRQ EKLAETSRLS RYRCRSRSRS FSGSPPRRYR
501: RSRSPSRSRS SRRYYSSSHS RSPSRTRSPS PYSRSPRIRN RSKH
001: MWHEARRSEK KVHDMMDAAR KRAQRRAIYL AKRRGDPIQS IQAVGSRYRV FRDDGLYQAT EDQQGLIPWN GKQDVMIDRF DGRALLDFVR EAGSRSVRPH
101: KKTEEEEELE EFVNFERYRD LIKHRRRGFS DEEGLQHVHQ ELEAKLAAPF LGTRTQPAQP PANKGTYSQV GFSYAGNGKD NSLDADEDDV DDDEDDEDEE
201: EEFDSNDSDD EGMETIAKQF GIKRYGWLVY MDKKAKEEEK RQKELIKGDP SIKKLSRKER RKVSRIERDR ERETSRSVGR QIIHHDPYRE SRRSPTYEAY
301: PRSRRSRSRS RSYSPSYSRR NGRGDHSDEI SKPKIEYITE FGGGSGDMRS PKFEGYSPPR SPPSQSDLLS RPSPGRILEA LHVDPASDIS LEKDKVAKPA
401: KSTVSTSTAL AKLSKVAGTS SSKQSQAEKK ETPQERLKRI MNKQLTKQIK KDSATETAKK REQERQRLEK LAETSRLSRN RQRSRSRSIS RSPPPRRHRR
501: SRSRSGSRSR RSRRHSSRSR SRSPSRSLSR SPKRSRRRSP SYSRSPRRRS SRSRH
101: KKTEEEEELE EFVNFERYRD LIKHRRRGFS DEEGLQHVHQ ELEAKLAAPF LGTRTQPAQP PANKGTYSQV GFSYAGNGKD NSLDADEDDV DDDEDDEDEE
201: EEFDSNDSDD EGMETIAKQF GIKRYGWLVY MDKKAKEEEK RQKELIKGDP SIKKLSRKER RKVSRIERDR ERETSRSVGR QIIHHDPYRE SRRSPTYEAY
301: PRSRRSRSRS RSYSPSYSRR NGRGDHSDEI SKPKIEYITE FGGGSGDMRS PKFEGYSPPR SPPSQSDLLS RPSPGRILEA LHVDPASDIS LEKDKVAKPA
401: KSTVSTSTAL AKLSKVAGTS SSKQSQAEKK ETPQERLKRI MNKQLTKQIK KDSATETAKK REQERQRLEK LAETSRLSRN RQRSRSRSIS RSPPPRRHRR
501: SRSRSGSRSR RSRRHSSRSR SRSPSRSLSR SPKRSRRRSP SYSRSPRRRS SRSRH
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); /.../72 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink). [Source:TAIR;Acc:AT4G36980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.