CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28232	Soybean	nucleus	80.29	79.96
VIT_00s0309g00020.t01	Wine grape	nucleus	38.4	25.79
KRH77297	Soybean	nucleus	53.18	23.96
KRH28192	Soybean	nucleus	52.98	23.33
KRG95012	Soybean	plastid	20.74	20.7
KRG90121	Soybean	nucleus	19.51	17.21
KRH07636	Soybean	nucleus	19.1	16.17
KRH62706	Soybean	nucleus	21.36	15.59
KRH20251	Soybean	nucleus, plastid	20.53	15.11
KRH06819	Soybean	nucleus	21.97	14.86
KRH66648	Soybean	nucleus	21.56	14.83
KRH13229	Soybean	nucleus	19.51	14.12
KRH20576	Soybean	nucleus	19.51	14.12
TraesCS3B01G590300.1	Wheat	nucleus	17.25	13.38
KRG89164	Soybean	nucleus	18.69	12.71
KRH49479	Soybean	nucleus	18.48	12.69
Os04t0544100-01	Rice	nucleus	21.56	12.49
EES05802	Sorghum	nucleus	19.51	12.07
EES12588	Sorghum	nucleus	21.36	11.67
TraesCS2D01G389100.1	Wheat	nucleus	20.94	10.62
TraesCS2B01G409600.1	Wheat	nucleus	20.94	10.6
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	20.53	9.92
KRH56252	Soybean	nucleus	4.31	9.86
KRH28566	Soybean	nucleus	12.53	4.22
KRH35283	Soybean	nucleus	1.23	4.2
KRH08338	Soybean	nucleus	12.73	4.14
KRH76897	Soybean	nucleus	12.12	3.95
KRH69981	Soybean	nucleus	11.7	3.82
KRH67447	Soybean	nucleus	5.54	3.72
KRH19618	Soybean	nucleus	6.16	3.65
KRG95723	Soybean	nucleus	5.34	3.59
KRH32246	Soybean	nucleus	5.95	3.53
KRH34133	Soybean	nucleus	4.93	3.5
KRG92731	Soybean	nucleus	4.93	3.37
KRH39353	Soybean	nucleus	2.67	3.23
KRG94709	Soybean	nucleus	1.85	2.99
KRG91550	Soybean	nucleus	2.05	2.9
KRH68776	Soybean	nucleus	3.7	2.66
TraesCS3A01G520700.1	Wheat	nucleus	1.23	2.08
KRH76344	Soybean	nucleus	1.03	1.51
KRG97025	Soybean	nucleus	0.82	1.41
KRH67444	Soybean	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100783959	Gene3D:2.30.280.10	MapMan:35.1	EMBL:ACUP02000668	EnsemblPlantsGene:GLYMA_01G202700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	UniProt:I1J9N6	InterPro:IPR003105	InterPro:IPR036987
EnsemblPlants:KRH77260	ProteinID:KRH77260	ProteinID:KRH77260.1	PFAM:PF02182	PFscan:PS51015	PANTHER:PTHR22884
PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	SMART:SM00466	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF88697
UniParc:UPI00023378D5	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:53546479..53548765

Molecular Weight (calculated)

54378.0 Da

IEP (calculated)

9.922

GRAVY (calculated)

-0.670

Length

487 amino acids

Sequence
(BLAST)

001: MTILLAVRDF PDGCGGFPKC VGTIVELEDT NKNAQHLARR YLPPRKASAV RDFLPLFGGC NDNGKKVGLQ NPSVDDNPLK NVAAAADDVK EVKSNIQDDY
101: GRKRKLVDIY QTDSEKNVAE RVKKLHAFEE PSSSQMKIVL GLMAKSACPW SSGKGSSNLK LGDAKNGDES KKVFSFALPD RSRRAIKTKG LLGQKPLKKK
201: GNASASQGTG ELEIWEKEDR LDPGEISEDL QIFLKSHKFG VNVTPSSHSN FIGNENDRKK VRETLQLFQV VSRKLLEEGE SKSNELGKRK RVDLIAARIL
301: KDNGNHVNSG KKILGPVPGV EVGDEFQYRV ELNIIGLHRQ IQGGIDYVKH NGKILATSIV ASGGYADYLV NSDILVYTGQ GGNVMSNDRK PEDQKLERGN
401: LALKNSSEEK NPVRVIRGSE AMDDKYKTYV YDGLYVVETY WQDRGSHGKL VYRFRLQRIP GQKLALKEVK KSKYFKTNFH MCCEHHR

Best Arabidopsis Sequence Match ( AT2G22740.1 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.