Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77389 | Sorghum | nucleus | 65.99 | 67.96 |
| EES18997 | Sorghum | nucleus | 66.28 | 60.64 |
| Zm00001d024810_P001 | Maize | nucleus | 67.44 | 59.49 |
| KXG21280 | Sorghum | nucleus | 59.88 | 57.87 |
| KXG21281 | Sorghum | nucleus | 24.13 | 47.98 |
| KXG21283 | Sorghum | nucleus | 33.43 | 47.13 |
| OQU77390 | Sorghum | nucleus | 29.36 | 41.39 |
| EES18996 | Sorghum | nucleus | 31.4 | 37.5 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 18.02 | 34.44 |
| EER88198 | Sorghum | nucleus | 31.1 | 33.65 |
| EER94504 | Sorghum | nucleus | 27.62 | 32.99 |
| OQU76057 | Sorghum | nucleus | 29.36 | 32.9 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 16.57 | 31.67 |
| EES18995 | Sorghum | nucleus | 25.29 | 31.52 |
| EER89299 | Sorghum | nucleus | 27.33 | 30.72 |
| EER89573 | Sorghum | nucleus | 28.2 | 30.7 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 15.99 | 30.39 |
| EER88196 | Sorghum | nucleus | 27.91 | 30.38 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 16.57 | 28.79 |
| EER89387 | Sorghum | nucleus | 26.45 | 28.62 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 19.48 | 25.97 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 22.67 | 25.66 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 15.12 | 25.37 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 19.77 | 24.82 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 17.15 | 24.69 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 19.48 | 24.45 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 18.9 | 23.81 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 14.83 | 23.61 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 18.6 | 23.36 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 18.6 | 23.36 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 15.7 | 22.69 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 19.19 | 22.6 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 22.97 | 22.57 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 22.97 | 22.57 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 20.93 | 21.36 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 17.73 | 20.47 |
| Solyc02g082380.1.1 | Tomato | nucleus | 11.05 | 17.12 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 20.93 | 16.82 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 20.93 | 16.78 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 20.06 | 16.08 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 20.06 | 16.08 |
| Os06t0173800-00 | Rice | vacuole | 15.12 | 15.9 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 20.06 | 15.86 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 19.77 | 15.85 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 19.77 | 15.81 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 19.77 | 15.81 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 19.48 | 15.58 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 19.19 | 15.35 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 15.7 | 15.17 |
| PGSC0003DMT400086891 | Potato | nucleus | 9.3 | 14.81 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 17.15 | 14.71 |
| Solyc02g082390.1.1 | Tomato | nucleus | 11.05 | 13.52 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 14.53 | 13.23 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 15.12 | 13.03 |
| KXG36349 | Sorghum | nucleus | 11.05 | 10.35 |
| PGSC0003DMT400091980 | Potato | nucleus | 9.59 | 8.19 |
| OQU89906 | Sorghum | nucleus | 7.27 | 7.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | UniProt:A0A1B6P6E4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KXG21278 | ProteinID:KXG21278 | ProteinID:KXG21278.1 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12374 | PANTHER:PTHR12374:SF28 | InterPro:SANT/Myb |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3009G039500 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00081ADC53 | : |
Description
hypothetical protein
Coordinates
chr9:-:3728007..3729622
Molecular Weight (calculated)
39465.4 Da
IEP (calculated)
6.040
GRAVY (calculated)
-0.843
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNFNGVWS ASEIDMVKSF ITSDNINNTY THDANKRQNE IVDELQASFI GKEKHQDTNM ENMDMLHGYI LDDVEVTKMT EEPPHKLNTI PNKKRQNAWS
101: QDEHKNFLRG LEAYGRGSWK NISRYFVPTR TPVQICSHAQ KYFHRKECTR KQRFSINDVS LYDTKPWVQK NSSSLEALAL DHNAHNTNYY GFEGQHTTLN
201: KVAHASQVSS RQVATWTRGQ HIIGSSSIDP TMVQSDSLGW EAFTFTSGAN NMNYDQYDFD GQHGDMNNLV YADQVSNNQV ATWTRGQETT IPSVAPMTVQ
301: NSLPSWEVLS FTNSDYNTNY CDFDEQQVAM NNIARGQPWW STTK
101: QDEHKNFLRG LEAYGRGSWK NISRYFVPTR TPVQICSHAQ KYFHRKECTR KQRFSINDVS LYDTKPWVQK NSSSLEALAL DHNAHNTNYY GFEGQHTTLN
201: KVAHASQVSS RQVATWTRGQ HIIGSSSIDP TMVQSDSLGW EAFTFTSGAN NMNYDQYDFD GQHGDMNNLV YADQVSNNQV ATWTRGQETT IPSVAPMTVQ
301: NSLPSWEVLS FTNSDYNTNY CDFDEQQVAM NNIARGQPWW STTK
001: MDAAIPIWKR DDDKRFELAL VRFPAEGSPD FLENIAQFLQ KPLKEVYSYY QALVDDVTLI ESGKYPLPKY PEDDYVSLPE ATKSKTQGTG KKKGIPWSPE
101: EHRLFLDGLN KYGKGDWKSI SRECVTSRSP MQVASHAQKY FLRQKNKKGK RFSIHDMTLG DAENVTVPVS NLNSMGQQPH FDDQSPPDHY QDYFSQSNVT
201: IPGCNMHFMG QQPRFGDQIP PGEYHPYSRD NENFGFFDDD GEDDGSLASF QQLYKA
101: EHRLFLDGLN KYGKGDWKSI SRECVTSRSP MQVASHAQKY FLRQKNKKGK RFSIHDMTLG DAENVTVPVS NLNSMGQQPH FDDQSPPDHY QDYFSQSNVT
201: IPGCNMHFMG QQPRFGDQIP PGEYHPYSRD NENFGFFDDD GEDDGSLASF QQLYKA
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SQY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.