Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024814_P001 | Maize | nucleus | 63.58 | 39.15 |
| OQU77390 | Sorghum | nucleus | 50.87 | 36.07 |
| KXG21283 | Sorghum | nucleus | 50.87 | 36.07 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 30.64 | 29.44 |
| EES18996 | Sorghum | nucleus | 48.55 | 29.17 |
| EES18995 | Sorghum | nucleus | 45.09 | 28.26 |
| EER89299 | Sorghum | nucleus | 47.98 | 27.12 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 27.75 | 26.67 |
| OQU77389 | Sorghum | nucleus | 50.87 | 26.35 |
| OQU76057 | Sorghum | nucleus | 45.66 | 25.73 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 30.06 | 25.37 |
| EER88198 | Sorghum | nucleus | 46.24 | 25.16 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 34.68 | 25.1 |
| EER89573 | Sorghum | nucleus | 45.66 | 25.0 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 28.32 | 24.75 |
| KXG21280 | Sorghum | nucleus | 50.87 | 24.72 |
| EES18997 | Sorghum | nucleus | 53.18 | 24.47 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 33.53 | 24.37 |
| KXG21278 | Sorghum | nucleus | 47.98 | 24.13 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 24.86 | 23.76 |
| EER89387 | Sorghum | nucleus | 43.35 | 23.58 |
| EER88196 | Sorghum | nucleus | 42.77 | 23.42 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 36.42 | 22.99 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 36.42 | 22.99 |
| EER94504 | Sorghum | nucleus | 38.15 | 22.92 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 34.68 | 21.98 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 34.68 | 21.9 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 32.37 | 21.71 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 33.53 | 21.17 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 34.68 | 20.13 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 33.53 | 19.86 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 34.1 | 19.41 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 23.7 | 18.98 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 38.15 | 18.86 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 36.42 | 18.69 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 37.57 | 18.57 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 42.2 | 17.06 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 41.04 | 16.55 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 41.04 | 16.51 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 40.46 | 16.32 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 39.88 | 16.05 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 39.31 | 15.81 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 38.73 | 15.62 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 31.79 | 15.45 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 38.73 | 15.4 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 38.15 | 15.38 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 37.57 | 15.12 |
| Os06t0173800-00 | Rice | vacuole | 28.32 | 14.98 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 31.21 | 13.47 |
| Solyc02g082380.1.1 | Tomato | nucleus | 16.76 | 13.06 |
| PGSC0003DMT400086891 | Potato | nucleus | 16.18 | 12.96 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 27.17 | 12.43 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 27.17 | 11.78 |
| KXG36349 | Sorghum | nucleus | 21.97 | 10.35 |
| Solyc02g082390.1.1 | Tomato | nucleus | 16.76 | 10.32 |
| OQU89906 | Sorghum | nucleus | 15.03 | 7.72 |
| PGSC0003DMT400091980 | Potato | nucleus | 17.92 | 7.69 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | UniProt:A0A1B6P6R9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KXG21281 | ProteinID:KXG21281 | ProteinID:KXG21281.1 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | PANTHER:PTHR44042:SF3 | InterPro:SANT/Myb |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3009G039900 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00081AE38C | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:3825312..3826319
Molecular Weight (calculated)
20086.6 Da
IEP (calculated)
7.694
GRAVY (calculated)
-0.695
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNFNEGWS SSEIDMVKSL ITSHITNKTY TNDTNKKHNE FVDDLQAMFP WKEKHQVINL YVELVVEMTM AQSSNQHVVG SSALVNVVPK KRRHAVKFWT
101: TYEHRNFLHG LEAFGSGEWN SISKYFVPTK TPVQISSHAQ KYFHRQECTT RRQCFNTNNV SLCDTQPSMP EDQ
101: TYEHRNFLHG LEAFGSGEWN SISKYFVPTK TPVQISSHAQ KYFHRQECTT RRQCFNTNNV SLCDTQPSMP EDQ
001: MGRRCSHCGN VGHNSRTCSS YQTRVVRLFG VHLDTTSSSP PPPPPPSILA AAIKKSFSMD CLPACSSSSS SFAGYLSDGL AHKTPDRKKG VPWTAEEHRT
101: FLIGLEKLGK GDWRGISRNF VVTKSPTQVA SHAQKYFLRQ TTTLHHKRRR TSLFDMVSAG NVEENSTTKR ICNDHIGSSS KVVWKQGLLN PRLGYPDPKV
201: SVSGSGNSGG LDLELKLASI QSPESNIRPI SVT
101: FLIGLEKLGK GDWRGISRNF VVTKSPTQVA SHAQKYFLRQ TTTLHHKRRR TSLFDMVSAG NVEENSTTKR ICNDHIGSSS KVVWKQGLLN PRLGYPDPKV
201: SVSGSGNSGG LDLELKLASI QSPESNIRPI SVT
Arabidopsis Description
At5g56840 [Source:UniProtKB/TrEMBL;Acc:Q9FJS9]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.