CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G299800.1	Wheat	cytosol	30.98	67.91
Os10t0410750-00	Rice	cytosol	13.59	61.54
TraesCS5A01G292500.1	Wheat	cytosol	54.51	53.81
HORVU5Hr1G077430.6	Barley	cytosol	54.38	53.75
TraesCS5B01G292000.2	Wheat	cytosol	52.68	51.14
KXG23977	Sorghum	cytosol	22.48	49.71
KXG28202	Sorghum	cytosol	19.22	46.23
EER97875	Sorghum	cytosol	10.07	45.83
EES09607	Sorghum	cytosol	18.95	44.89
KXG28191	Sorghum	cytosol	18.17	43.85
OQU83244	Sorghum	cytosol	18.17	43.85
KXG28181	Sorghum	cytosol, plastid	18.43	42.73
OQU82908	Sorghum	cytosol	17.78	41.34
KXG23468	Sorghum	cytosol	14.25	41.29
OQU83239	Sorghum	cytosol	15.42	38.69
Zm00001d053082_P003	Maize	plasma membrane	30.98	37.03
KXG34287	Sorghum	cytosol	9.02	36.7
KXG21024	Sorghum	cytosol, mitochondrion	16.08	36.07
OQU78827	Sorghum	cytosol	10.46	32.39
EES15978	Sorghum	cytosol	24.05	31.29
KXG21018	Sorghum	cytosol	17.91	29.27
OQU83818	Sorghum	cytosol	23.01	28.07
OQU79134	Sorghum	cytosol	17.65	23.89
KXG28200	Sorghum	cytosol	20.0	23.43
OQU83226	Sorghum	nucleus	17.25	19.73
OQU83001	Sorghum	cytosol	18.3	17.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.46	Gene3D:3.30.200.20	UniProt:A0A1B6PQG2	InterPro:DUF3475	InterPro:DUF668
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG27908	ProteinID:KXG27908	ProteinID:KXG27908.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF05003	PFAM:PF11961	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27002	PANTHER:PTHR27002:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3005G061500	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00081ADF32	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:6677505..6691699

Molecular Weight (calculated)

86890.9 Da

IEP (calculated)

8.770

GRAVY (calculated)

-0.246

Length

765 amino acids

Sequence
(BLAST)

001: MLPRFFHRKT GSEASKRAFL PKSTDFGVLE GMLQDPCAAP MCLPMDFLKA ITQDFSQERE VGRGGYGVVY KGILQNGKAI AVKKLSEMQL EDGPFQNEVI
101: YLIGLKHKNI VKLVGYCAES RWEATQVSGK YVMAEIRKRL LCFEYLNKKS LDKHLSDESC GLKWNMRYQI IRGICSGLHY LHTECHIVHL DLKPENILLD
201: DGMVPKIADF GMSRLFGQQQ SRIITESRGG TRGYMAPEHL TNGFISTKSD IFSLGIIIIE LMTGSRDYPP SSEASFERFI KNVVENWRNN LEKAPKYIPL
301: EIESRQVNTC IVIGLNCVHS DPKKRPSALD ILQMLNAVGS TNRHALVTEI DTLGYSVGMT NPITMLNRLN SSSLFSFSAK GSKISILALE VANTIVKSSS
401: LMKILSKQSM EHLKEGVLRS EGVRRLISED HNQLVVLVEA DIRQMFRQFC SEVCRFGNMC VDPSWHNMFR CFDCLAGREM KTLKQMMNEE SVSNIEYLTK
501: LEKYTSELRG TLLVWDKCEK GLQYELCSGR SKRDQRNMLQ TMRRSLKHQR SVAKNLGNKS LWPKTMEDIV AKLVDIVHVL NFEIRRAFLK NHGDQSVAPV
601: TKLHQTLGPT GLALHYANVI LQINTLVLAS PAAVSYKARD ALYQALPPCI KSKLRECCHR ERTMNVAEVR AEMDRILQWL VPVAESTTSY YKNGAFGEWI
701: NMVMPEDIVV EEPYWPGEEE RQTIAGASAI QRHVVNKIET LYHADKQKTE GYILDLIRGL HRLVC

Best Arabidopsis Sequence Match ( AT1G34320.1 )
(BLAST)

001: MGGLCSRSSS VNNAPGGTFA HVNGHHLNNN ASDLNSHSGE SGLKDDPSPV TENVDDNKHT SESFSFPIVS SGSHPQNIED GIPRLSRVLS QKSRSTKSRQ
101: AAVAKVSEVS SLLGRAGTMG LGKAVDVLDT LGSSMTNLNL SGGFSSATTV KGNKISILSF EVANTIVKGA NLMHSLSKDS ITHLKEVVLP SEGVQNLISK
201: DMDELLRIAA ADKREELRIF SGEVVRFGNR CKDPQYHNLD RFFDRLGSEF TPQKHLKQEA ETIMHQMMSF VHFTADLYHE LHALDRFEQD YQRKIQEEEN
301: PSTAQRGVGD TLAILRTELK SQKKHVRNLK KKSLWSRILE EVMEKLVDVV HFLHLEIHEA FGGADPDKPA NDPPINHKKL GSAGLALHYA NIITQIDTLV
401: SRSSTMPAST RDALYQGLPP SIKSALRSRI QSFQVKEELT VPQIKAEMEK TLQWLVPVAT NTTKAHHGFG WVGEWASSGS EANQRPAGQT ILRIDTLHHA
501: DKEKTEAYIL DLVVWLHHLV TQVRATTGYG LRSPVKSPIR SPNQKTIQLS SGSHNPSMGL PLLTTEDQEM LRDVSKRRKT PGISKSQEFE TVAKARLCKH
601: HRLSKSSSHS PMMGEMMKNK KDTFSTRRPS SVPIIDFDID RMKALDVIDR VDTIRSL

Arabidopsis Description

At1g34320 [Source:UniProtKB/TrEMBL;Acc:Q6NQ48]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.