Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0463700-01 | Rice | nucleus | 61.46 | 63.44 |
| Zm00001d020762_P001 | Maize | nucleus | 71.35 | 62.27 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 53.91 | 39.28 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 53.39 | 38.9 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 53.12 | 38.64 |
| EES14021 | Sorghum | nucleus | 44.01 | 38.24 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 54.17 | 38.1 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 28.39 | 36.82 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 26.82 | 31.69 |
| AT5G09540.1 | Thale cress | nucleus | 20.83 | 28.57 |
| CDY21586 | Canola | cytosol | 20.83 | 27.68 |
| Bra009389.1-P | Field mustard | cytosol | 21.09 | 27.65 |
| CDY69792 | Canola | cytosol | 21.09 | 27.65 |
| GSMUA_Achr10P... | Banana | cytosol | 29.95 | 27.32 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 27.08 | 25.81 |
| KXG36712 | Sorghum | cytosol | 28.65 | 25.29 |
| EER92178 | Sorghum | nucleus | 26.04 | 24.81 |
| CDY31322 | Canola | cytosol | 21.35 | 21.98 |
| Bra031921.1-P | Field mustard | cytosol | 21.09 | 21.95 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 26.3 | 20.78 |
| KRH42098 | Soybean | nucleus | 23.7 | 20.0 |
| AT5G64360.7 | Thale cress | nucleus | 23.96 | 19.83 |
| KRH49811 | Soybean | nucleus | 23.96 | 19.53 |
| Solyc07g007230.2.1 | Tomato | nucleus | 21.61 | 19.48 |
| KRH10601 | Soybean | nucleus | 24.22 | 18.71 |
| KRH21766 | Soybean | nucleus | 23.18 | 17.84 |
| PGSC0003DMT400079004 | Potato | cytosol | 23.44 | 17.61 |
| Bra024289.1-P | Field mustard | nucleus | 20.83 | 17.43 |
| CDX84519 | Canola | nucleus | 20.57 | 16.63 |
| CDY58269 | Canola | nucleus | 21.09 | 16.14 |
| Solyc11g006140.1.1 | Tomato | nucleus | 23.44 | 15.13 |
| CDY46799 | Canola | nucleus | 15.36 | 15.05 |
| Solyc11g006170.1.1 | Tomato | nucleus | 24.74 | 14.64 |
| PGSC0003DMT400073845 | Potato | cytosol | 24.22 | 14.26 |
| Bra027007.1-P | Field mustard | nucleus | 25.78 | 13.27 |
| CDY45473 | Canola | nucleus | 25.78 | 13.24 |
| CDY45966 | Canola | nucleus | 25.26 | 13.04 |
| Solyc01g105780.2.1 | Tomato | nucleus | 22.92 | 12.27 |
| AT1G62970.1 | Thale cress | nucleus | 24.22 | 11.67 |
| PGSC0003DMT400083794 | Potato | nucleus | 22.4 | 11.57 |
Protein Annotations
| EnsemblPlants:KXG35797 | EnsemblPlantsGene:SORBI_3002G229900 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45496 | PFscan:PS50076 | ProteinID:KXG35797 | ProteinID:KXG35797.1 | SEG:seg |
| SUPFAM:SSF46565 | UniParc:UPI00081ABF9F | UniProt:A0A1B6QCZ9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr2:+:62127848..62129206
Molecular Weight (calculated)
40692.7 Da
IEP (calculated)
9.774
GRAVY (calculated)
-0.351
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSAAGAGA SRRKGEQWLS VAEKLLVARD LEGCKQFASQ ALAADPHTPG ADDLHAAASS LLAAQRRRLP NGQPDPYGVL DLDPANPASR RLDAIHSQYR
101: RLSFLLNRSH PDRPCSVALA EAARLVADAW AFLSDPVRKS ALDADLDAAA AARAYHSPLN LPQPHSQSPL PARLTPPVAA PSQRQTPLPA APSQRSTPPL
201: VSPPPRATSP PPTTPQTPVA ATVPAVKSGA APSSTFWTVC SACCHIHQFD GQYEMRKLLC PSCRQPFVAK AMAEPPPIVP GTDMYYCTWG FFPVGFPGCP
301: GFEKMVNAQP SGQDHLNVPW LGSTGGVKGN AQNGMPPVSA PVVEVPDEIP IEVPAVTPPA KPMRVKVGAK KRGRPKGSKN KKKL
101: RLSFLLNRSH PDRPCSVALA EAARLVADAW AFLSDPVRKS ALDADLDAAA AARAYHSPLN LPQPHSQSPL PARLTPPVAA PSQRQTPLPA APSQRSTPPL
201: VSPPPRATSP PPTTPQTPVA ATVPAVKSGA APSSTFWTVC SACCHIHQFD GQYEMRKLLC PSCRQPFVAK AMAEPPPIVP GTDMYYCTWG FFPVGFPGCP
301: GFEKMVNAQP SGQDHLNVPW LGSTGGVKGN AQNGMPPVSA PVVEVPDEIP IEVPAVTPPA KPMRVKVGAK KRGRPKGSKN KKKL
001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT
Arabidopsis Description
AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.