CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	81.38	80.09
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	60.92	66.92
HORVU2Hr1G030250.2	Barley	cytosol	54.94	61.44
TraesCS2A01G165100.1	Wheat	cytosol	54.48	60.61
TraesCS2B01G191300.1	Wheat	cytosol	54.25	60.2
TraesCS2D01G172200.1	Wheat	cytosol	53.79	59.85
EER92178	Sorghum	nucleus	43.45	46.9
GSMUA_Achr1P21390_001	Banana	cytosol	35.86	38.71
GSMUA_Achr10P...	Banana	cytosol	37.24	38.48
GSMUA_Achr3P06790_001	Banana	cytosol	26.9	36.0
AT5G09540.1	Thale cress	nucleus	18.62	28.93
KXG35797	Sorghum	nucleus	25.29	28.65
Bra009389.1-P	Field mustard	cytosol	18.85	27.99
CDY69792	Canola	cytosol	18.85	27.99
CDY21586	Canola	cytosol	18.16	27.34
EES14021	Sorghum	nucleus	26.67	26.24
CDY31322	Canola	cytosol	21.38	24.93
Bra031921.1-P	Field mustard	cytosol	21.15	24.93
KRH42098	Soybean	nucleus	25.06	23.96
VIT_03s0017g00300.t01	Wine grape	nucleus	25.98	23.25
KRH49811	Soybean	nucleus	24.37	22.51
AT5G64360.7	Thale cress	nucleus	23.45	21.98
Bra024289.1-P	Field mustard	nucleus	22.53	21.35
Solyc07g007230.2.1	Tomato	nucleus	20.69	21.13
KRH10601	Soybean	nucleus	24.14	21.13
CDX84519	Canola	nucleus	21.84	20.0
KRH21766	Soybean	nucleus	22.07	19.24
CDY58269	Canola	nucleus	21.84	18.92
PGSC0003DMT400079004	Potato	cytosol	21.84	18.59
CDY46799	Canola	nucleus	15.17	16.84
Solyc01g105780.2.1	Tomato	nucleus	25.75	15.62
PGSC0003DMT400083794	Potato	nucleus	25.98	15.21
Solyc11g006170.1.1	Tomato	nucleus	22.3	14.95
PGSC0003DMT400073845	Potato	cytosol	22.3	14.88
Solyc11g006140.1.1	Tomato	nucleus	19.54	14.29
CDY45966	Canola	nucleus	20.92	12.23
CDY45473	Canola	nucleus	20.92	12.17
Bra027007.1-P	Field mustard	nucleus	20.69	12.06
AT1G62970.1	Thale cress	nucleus	20.0	10.92

Protein Annotations

EnsemblPlants:KXG36712	EnsemblPlantsGene:SORBI_3002G377800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR45496
ProteinID:KXG36712	ProteinID:KXG36712.2	SEG:seg	UniParc:UPI0009DC8BC7	UniProt:A0A1B6QFK2	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:+:73447782..73449089

Molecular Weight (calculated)

45217.1 Da

IEP (calculated)

5.252

GRAVY (calculated)

-0.306

Length

435 amino acids

Sequence
(BLAST)

001: MDFSGGGGRS RAEPARWLEI AGKLLAARDL VGCKRLAERA VEADPDLPGA DELLAVADVL LASQRQLPSG RPDPVAVLQL QPAPGLDPAA AKRSFHRLSQ
101: LVSSSRNPRP AADTALHFIQ EAFADLSNNA SADPPPAPAA APPPPIPAPA PAPAPSPIPA PAPAPAPASG DASASADADA FWTVCPYCCH VYQYQRALVG
201: RTLRCQSAGC RRAFVATEIP NAPPIVPGTD MYYCAWGFVP MGFPKAADLS TNWRPFCPMF TGNSESPPQP APAVTVNVDV QNVENNGGAD VQSVENNGGP
301: INANSTPASV QPPDKSGDTG RASGPSRGRM KKTTARKKVG VVPKKQGSSS VGSGIGPSML GAVSLNGDTG SGQTVGTREI NINEVAKPSD GATMLNFGVD
401: EDIGFDLDVD TTDAILGNLH NLPFLREDDN NRRMF

Best Arabidopsis Sequence Match ( AT2G01710.1 )
(BLAST)

001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.