Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G080290.6 | Barley | nucleus | 18.71 | 57.2 |
| KXG24287 | Sorghum | nucleus | 53.9 | 55.77 |
| TraesCS6B01G361300.1 | Wheat | nucleus | 17.97 | 54.51 |
| TraesCS6D01G309500.4 | Wheat | nucleus | 17.84 | 54.14 |
| Zm00001d017507_P001 | Maize | nucleus | 34.7 | 52.73 |
| Zm00001d035113_P001 | Maize | nucleus | 45.97 | 44.27 |
| TraesCS1B01G326700.2 | Wheat | nucleus | 32.09 | 32.87 |
| HORVU1Hr1G067100.2 | Barley | nucleus | 31.85 | 32.66 |
| Zm00001d017505_P003 | Maize | plastid | 45.85 | 32.57 |
| TraesCS1A01G314400.2 | Wheat | nucleus | 31.35 | 32.11 |
| TraesCS1D01G314900.1 | Wheat | nucleus | 31.1 | 31.85 |
| GSMUA_Achr2P23110_001 | Banana | nucleus | 4.71 | 26.57 |
| TraesCS6A01G330400.1 | Wheat | nucleus, plastid | 16.48 | 26.44 |
| Bra033600.1-P | Field mustard | endoplasmic reticulum | 9.91 | 25.64 |
| CDY56766 | Canola | nucleus | 13.63 | 20.52 |
| CDY12124 | Canola | nucleus | 13.63 | 18.68 |
| CDX90315 | Canola | nucleus | 13.63 | 18.58 |
| CDX72715 | Canola | nucleus | 11.9 | 18.5 |
| Bra010701.1-P | Field mustard | nucleus | 13.51 | 18.47 |
| CDX87111 | Canola | nucleus | 12.27 | 18.33 |
| PGSC0003DMT400045728 | Potato | nucleus | 15.61 | 17.65 |
| AT4G39160.2 | Thale cress | nucleus | 13.63 | 17.63 |
| KRG92007 | Soybean | nucleus | 11.15 | 17.34 |
| CDY16866 | Canola | vacuole | 11.65 | 17.28 |
| Solyc02g081640.2.1 | Tomato | nucleus | 14.87 | 17.02 |
| KRH34776 | Soybean | nucleus | 10.41 | 16.87 |
| VIT_03s0038g04460.t01 | Wine grape | nucleus | 18.09 | 13.87 |
| KRH27726 | Soybean | nucleus | 13.88 | 11.81 |
| Os03t0840500-00 | Rice | cytosol, nucleus | 5.95 | 11.24 |
| KRH77688 | Soybean | nucleus | 13.01 | 11.23 |
Protein Annotations
| Gene3D:1.20.58.1880 | MapMan:15.4.3.2 | MapMan:15.5.2.2 | UniProt:A0A1W0VR55 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:Homeobox-like_sf | InterPro:IPR017884 | InterPro:Myeloid_leukemia_factor | ProteinID:OQU75760.1 | EnsemblPlants:OQU75762 | ProteinID:OQU75762 |
| ProteinID:OQU75762.1 | PFAM:PF10248 | PFAM:PF15963 | PFscan:PS51293 | InterPro:SANT/Myb | InterPro:SANT_dom |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3010G025850 | SUPFAM:SSF46689 | UniParc:UPI0009DC8325 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:2094287..2114599
Molecular Weight (calculated)
89845.6 Da
IEP (calculated)
5.033
GRAVY (calculated)
-1.118
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MARNKTGPSY LRNETLRSPE ATRAATALTR AEATAGRREA TVGQREATAA WRTATATLHP SPSCFSPVLE NLRILSLQSP PNCCEMDRGQ NRRDDVFRGR
101: DPFAGFGSHR SLISGFFGGR DRFDDPFFTR PFGGQMMGEH GMFGPGPFGG QMMGEHDMFG PSPFGPMGGP FGDMGNHGFI EQAPPRGNSR RPVITEVDED
201: EGENAEHGNK QPNQDSYVQE PDDGSDGTEG GQVQLRRDLN SANSGGQPQA RTFTYQSSSV TYGGINGAYY TASTTRRTGS DGITVEESKE ADTTTKEATH
301: RISRGIHDKG HSLTRKLNSD GKVDTTQTMH NLNEDELAGF EESWKGNAGH YLPGWNQNAG APNSDNSGRE KGKSKSVSFY LSDASGVATP TDTNSEMGNI
401: GNSCSDKLTD ENLSNSSQQM TEKHSVTEDQ YSNDQDHEGE PLDHTVEQQP NSDVGEIASS MKLRCRKKLQ KVGTPNHTVD DCFDEDCVEP SLAEEDNDSG
501: DDYTTGNKRK ARKKSRDGVE ESQQQKVQKN KSKVSSRGRK RTLKDELAAK PEKKKLTHRI RQRTPKEIKT LLESEEIDPM KLSAAHLRLL QEARERVNPK
601: EIPSGPSSNS RSFGLEDMDD LDYRDEEARF FDNDGTENHV QNTTKLNYQS YMNKPARGKW SKSDTDLFYE GIRQFGSDFA MIQQLLPDKT RHQVRQKFKS
701: EEKKNPLLVH DAIFHRSGDN LYFKKVIKQL NIEDVVLPEI NNAQKQDGTS SERGPGNENV LDDFNEEENS SNWSNEEHGG QMDDVQEEHD LGNGGDDDDL
801: GDVFDWY
101: DPFAGFGSHR SLISGFFGGR DRFDDPFFTR PFGGQMMGEH GMFGPGPFGG QMMGEHDMFG PSPFGPMGGP FGDMGNHGFI EQAPPRGNSR RPVITEVDED
201: EGENAEHGNK QPNQDSYVQE PDDGSDGTEG GQVQLRRDLN SANSGGQPQA RTFTYQSSSV TYGGINGAYY TASTTRRTGS DGITVEESKE ADTTTKEATH
301: RISRGIHDKG HSLTRKLNSD GKVDTTQTMH NLNEDELAGF EESWKGNAGH YLPGWNQNAG APNSDNSGRE KGKSKSVSFY LSDASGVATP TDTNSEMGNI
401: GNSCSDKLTD ENLSNSSQQM TEKHSVTEDQ YSNDQDHEGE PLDHTVEQQP NSDVGEIASS MKLRCRKKLQ KVGTPNHTVD DCFDEDCVEP SLAEEDNDSG
501: DDYTTGNKRK ARKKSRDGVE ESQQQKVQKN KSKVSSRGRK RTLKDELAAK PEKKKLTHRI RQRTPKEIKT LLESEEIDPM KLSAAHLRLL QEARERVNPK
601: EIPSGPSSNS RSFGLEDMDD LDYRDEEARF FDNDGTENHV QNTTKLNYQS YMNKPARGKW SKSDTDLFYE GIRQFGSDFA MIQQLLPDKT RHQVRQKFKS
701: EEKKNPLLVH DAIFHRSGDN LYFKKVIKQL NIEDVVLPEI NNAQKQDGTS SERGPGNENV LDDFNEEENS SNWSNEEHGG QMDDVQEEHD LGNGGDDDDL
801: GDVFDWY
001: MQGGGGRDPF GGGFGGPFGG FGGGSFGGFG RGSFGGFGGP NGPPSLMSNF FGGRDPFDDP FFTQPFGGGM FQSNFFGPSM NPFAEMHRLP QGFIENNQPP
101: GPSRSRGPVI EEIDSDDEKE GEGDKEKKGS LGKHGRSSSE AETEDARVRE RRNRQMQSMN VNAERRNREM QNMNVNAERR NPQMQNMNVN AMVNNGQWQP
201: QTGSYSFQSS TVTYGGQNGN YYTSSKTRRT GSDGLTLEES REANTATREA AHMISRGLHN KGHTVARKLN SDGRVDTTQT LHNLNEDELA GFEQSWSGNA
301: RRQMQLPSRS GSFGSGLVNR EQPMLLPSTD PSPSHARAES SRRPKAAMNV RGHGTN
101: GPSRSRGPVI EEIDSDDEKE GEGDKEKKGS LGKHGRSSSE AETEDARVRE RRNRQMQSMN VNAERRNREM QNMNVNAERR NPQMQNMNVN AMVNNGQWQP
201: QTGSYSFQSS TVTYGGQNGN YYTSSKTRRT GSDGLTLEES REANTATREA AHMISRGLHN KGHTVARKLN SDGRVDTTQT LHNLNEDELA GFEQSWSGNA
301: RRQMQLPSRS GSFGSGLVNR EQPMLLPSTD PSPSHARAES SRRPKAAMNV RGHGTN
Arabidopsis Description
AT4g22740/T12H17_130 [Source:UniProtKB/TrEMBL;Acc:Q940N4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.