Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21278 | Sorghum | nucleus | 67.96 | 65.99 |
| EES18997 | Sorghum | nucleus | 69.76 | 61.97 |
| Zm00001d024810_P001 | Maize | nucleus | 70.96 | 60.77 |
| KXG21280 | Sorghum | nucleus | 63.77 | 59.83 |
| KXG21281 | Sorghum | nucleus | 26.35 | 50.87 |
| KXG21283 | Sorghum | nucleus | 36.83 | 50.41 |
| OQU77390 | Sorghum | nucleus | 30.84 | 42.21 |
| EES18996 | Sorghum | nucleus | 32.63 | 37.85 |
| EER94504 | Sorghum | nucleus | 31.74 | 36.81 |
| EER88198 | Sorghum | nucleus | 35.03 | 36.79 |
| OQU76057 | Sorghum | nucleus | 32.63 | 35.5 |
| EER88196 | Sorghum | nucleus | 32.93 | 34.81 |
| EER89573 | Sorghum | nucleus | 32.63 | 34.49 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 17.66 | 32.78 |
| EER89299 | Sorghum | nucleus | 29.94 | 32.68 |
| EES18995 | Sorghum | nucleus | 26.05 | 31.52 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 16.47 | 30.56 |
| EER89387 | Sorghum | nucleus | 28.74 | 30.19 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 16.17 | 29.83 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 16.77 | 28.28 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 24.55 | 26.97 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 16.47 | 26.83 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 20.66 | 26.74 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 20.96 | 25.55 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 16.47 | 25.46 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 20.66 | 25.18 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 20.36 | 24.82 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 17.66 | 24.69 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 24.85 | 24.63 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 20.06 | 24.54 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 25.45 | 24.29 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 25.15 | 24.0 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 17.07 | 23.95 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 19.46 | 23.72 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 20.06 | 22.95 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 19.76 | 22.15 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 23.35 | 18.22 |
| Solyc02g082380.1.1 | Tomato | nucleus | 11.68 | 17.57 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 22.46 | 17.48 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 22.16 | 17.25 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 21.86 | 17.02 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 21.86 | 17.02 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 21.86 | 16.98 |
| Os06t0173800-00 | Rice | vacuole | 16.47 | 16.82 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 21.86 | 16.78 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 21.26 | 16.51 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 21.26 | 16.51 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 20.66 | 16.05 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 17.07 | 16.01 |
| PGSC0003DMT400086891 | Potato | nucleus | 10.18 | 15.74 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 18.26 | 15.21 |
| Solyc02g082390.1.1 | Tomato | nucleus | 11.68 | 13.88 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 15.87 | 13.28 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 14.97 | 13.23 |
| KXG36349 | Sorghum | nucleus | 11.68 | 10.63 |
| PGSC0003DMT400091980 | Potato | nucleus | 10.48 | 8.68 |
| OQU89906 | Sorghum | nucleus | 7.49 | 7.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | UniProt:A0A1Z5R1H9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlants:OQU77389 |
| ProteinID:OQU77389 | ProteinID:OQU77389.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12374 | PANTHER:PTHR12374:SF28 |
| InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3009G039600 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A88BF8 |
| RefSeq:XP_002440570.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:3744840..3746442
Molecular Weight (calculated)
38000.3 Da
IEP (calculated)
7.221
GRAVY (calculated)
-0.787
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNLNGVWS GSEIDMVRSF IASHNTNNTY TSDTNKKHND IVDELQARLL GKEKQHQDTN MENMDMFHGY ILDDVVSMNM VEEPPRKLNS VPKKKRKHPV
101: IAWTHDEHKN FLRGLEVYGR GSWKNISRYF VPTRTPIQIC SHAQKYFQRK ECTTRKQRFS INDVGLYDTE PWVQKNSSSL EALAFGHSAY NTNNYDIEGQ
201: HAVLNKLTHA SEVSTTRGQH IIGSSSKDPM MVQSNSPGWV GPTFPNGANN TNYFGLQHDA MNNLTCVDQV SNNQVATWTR GEQETTSLVP PMTVQNTSHR
301: WEVFPIDGSA CNKNYYVFDG QQVPMNNITG GQPW
101: IAWTHDEHKN FLRGLEVYGR GSWKNISRYF VPTRTPIQIC SHAQKYFQRK ECTTRKQRFS INDVGLYDTE PWVQKNSSSL EALAFGHSAY NTNNYDIEGQ
201: HAVLNKLTHA SEVSTTRGQH IIGSSSKDPM MVQSNSPGWV GPTFPNGANN TNYFGLQHDA MNNLTCVDQV SNNQVATWTR GEQETTSLVP PMTVQNTSHR
301: WEVFPIDGSA CNKNYYVFDG QQVPMNNITG GQPW
001: MSSSTMYRGV NMFSPANTNW IFQEVREATW TAEENKRFEK ALAYLDDKDN LESWSKIADL IPGKTVADVI KRYKELEDDV SDIEAGLIPI PGYGGDASSA
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.