Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21283 | Sorghum | nucleus | 61.89 | 61.89 |
| Zm00001d010889_P001 | Maize | plastid | 52.46 | 53.11 |
| KXG21281 | Sorghum | nucleus | 36.07 | 50.87 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 23.77 | 32.22 |
| EES18996 | Sorghum | nucleus | 37.3 | 31.6 |
| EES18995 | Sorghum | nucleus | 35.66 | 31.52 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 22.95 | 31.11 |
| OQU77389 | Sorghum | nucleus | 42.21 | 30.84 |
| KXG21278 | Sorghum | nucleus | 41.39 | 29.36 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 23.36 | 28.79 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 21.31 | 28.73 |
| EER89299 | Sorghum | nucleus | 34.84 | 27.78 |
| EER94504 | Sorghum | nucleus | 32.38 | 27.43 |
| OQU76057 | Sorghum | nucleus | 34.43 | 27.36 |
| KXG21280 | Sorghum | nucleus | 39.75 | 27.25 |
| EER89573 | Sorghum | nucleus | 35.25 | 27.22 |
| EES18997 | Sorghum | nucleus | 40.98 | 26.6 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 22.13 | 26.34 |
| EER89387 | Sorghum | nucleus | 34.02 | 26.1 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 27.05 | 25.58 |
| EER88198 | Sorghum | nucleus | 33.2 | 25.47 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 24.59 | 25.1 |
| EER88196 | Sorghum | nucleus | 32.38 | 25.0 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 27.05 | 24.09 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 22.95 | 23.53 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 25.41 | 22.71 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 20.08 | 22.69 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 25.41 | 22.63 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 25.41 | 22.63 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 23.77 | 21.17 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 24.59 | 20.13 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 25.0 | 20.07 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 23.77 | 19.86 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 25.82 | 18.69 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 26.23 | 18.29 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 25.82 | 18.0 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 27.46 | 15.65 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 27.05 | 15.38 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 27.05 | 15.35 |
| Solyc02g082380.1.1 | Tomato | nucleus | 13.93 | 15.32 |
| PGSC0003DMT400086891 | Potato | nucleus | 13.52 | 15.28 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 26.64 | 15.15 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 26.64 | 15.15 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 26.64 | 15.12 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 26.23 | 14.92 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 25.82 | 14.48 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 25.41 | 14.42 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 25.41 | 14.42 |
| Os06t0173800-00 | Rice | vacuole | 19.26 | 14.37 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 22.95 | 14.04 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 21.72 | 14.02 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 20.08 | 13.76 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 22.13 | 13.47 |
| Solyc02g082390.1.1 | Tomato | nucleus | 14.75 | 12.81 |
| KXG36349 | Sorghum | nucleus | 15.98 | 10.63 |
| PGSC0003DMT400091980 | Potato | nucleus | 15.16 | 9.18 |
| OQU89906 | Sorghum | nucleus | 11.89 | 8.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:8069474 | UniProt:A0A1Z5R0X7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlants:OQU77390 |
| ProteinID:OQU77390 | ProteinID:OQU77390.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12374 | PANTHER:PTHR12374:SF28 |
| InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3009G040000 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A88BFC |
| RefSeq:XP_002440574.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:3832716..3833847
Molecular Weight (calculated)
27999.9 Da
IEP (calculated)
8.747
GRAVY (calculated)
-0.607
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNFNSVWS TSEINMAKSL ITSHITNNTY TSSAHVNNNF GMPMEAPLVD NMGMLKCCLM DETRAMRCRE GQQHMPNVVP KQRRHAVRFW TTHEHRNFLH
101: GLEVFGRGKW KNISKYFVPT RTPVQISSHA QKYFHRQECT TKKQHFSIND VSLYDTQPWV QNNSSRWETL TFTSGAFNTN YNNFDGKHVA FNSLACASQT
201: SFNQVATWIT DQQTTISSFV APVMEVDGSQ MTSNGHQLGH FLHN
101: GLEVFGRGKW KNISKYFVPT RTPVQISSHA QKYFHRQECT TKKQHFSIND VSLYDTQPWV QNNSSRWETL TFTSGAFNTN YNNFDGKHVA FNSLACASQT
201: SFNQVATWIT DQQTTISSFV APVMEVDGSQ MTSNGHQLGH FLHN
001: METLHPLLSH VPTSDHRFVV QEMMCLQSSS WTKEENKKFE RALAVYADDT PDRWFKVAAM IPGKTISDVM RQYSKLEEDL FDIEAGLVPI PGYRSVTPCG
101: FDQVVSPRDF DAYRKLPNGA RGFDQDRRKG VPWTEEEHRR FLLGLLKYGK GDWRNISRNF VGSKTPTQVA SHAQKYYQRQ LSGAKDKRRP SIHDITTVNL
201: LNANLSRPSS DHGCLVSKQA EPKLGFTDRD NAEEGVMFLG QNLSSVFSSY DPAIKFSGAN VYGEGGYCIS QDLETRK
101: FDQVVSPRDF DAYRKLPNGA RGFDQDRRKG VPWTEEEHRR FLLGLLKYGK GDWRNISRNF VGSKTPTQVA SHAQKYYQRQ LSGAKDKRRP SIHDITTVNL
201: LNANLSRPSS DHGCLVSKQA EPKLGFTDRD NAEEGVMFLG QNLSSVFSSY DPAIKFSGAN VYGEGGYCIS QDLETRK
Arabidopsis Description
At5g05790 [Source:UniProtKB/TrEMBL;Acc:Q9FFJ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.