CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00500_001	Banana	extracellular	22.68	62.64
OQU88147	Sorghum	nucleus	57.56	62.54
TraesCS1D01G241500.1	Wheat	nucleus	67.24	61.9
TraesCS1A01G241600.2	Wheat	nucleus	66.98	61.66
VIT_14s0068g01090.t01	Wine grape	nucleus	41.64	59.81
KRG94709	Soybean	nucleus	20.82	52.16
Bra006226.1-P	Field mustard	nucleus	41.11	51.84
CDX70530	Canola	nucleus	41.38	51.74
CDX78549	Canola	nucleus	41.25	51.49
GSMUA_Achr8P00490_001	Banana	nucleus	23.74	49.45
AT5G13960.1	Thale cress	nucleus	40.85	49.36
Solyc02g094520.2.1	Tomato	nucleus	43.5	48.45
KRH20251	Soybean	nucleus, plastid	42.04	47.89
KRH06819	Soybean	nucleus	43.77	45.83
OQU80399	Sorghum	nucleus	25.99	34.39
EES14036	Sorghum	nucleus	23.47	26.58
EES19725	Sorghum	nucleus	23.74	26.56
EER96294	Sorghum	nucleus	23.74	25.21
EES01635	Sorghum	nucleus	23.87	24.26
EES05802	Sorghum	nucleus	25.2	24.14
EES01534	Sorghum	nucleus	10.74	23.89
OQU78645	Sorghum	nucleus	23.08	23.32
EER96081	Sorghum	nucleus	24.4	22.17
EES10399	Sorghum	nucleus	22.68	20.88
EES12588	Sorghum	nucleus	24.67	20.88
EES13797	Sorghum	nucleus	26.79	17.86
EER96634	Sorghum	nucleus	27.85	16.85
EES13798	Sorghum	nucleus	27.32	16.35
OQU85329	Sorghum	nucleus	13.66	15.19
EES15150	Sorghum	nucleus	14.85	15.16
EES13161	Sorghum	nucleus	13.53	12.94
OQU80395	Sorghum	nucleus	9.81	12.48
KXG30908	Sorghum	nucleus	17.11	8.1

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	UniProt:A0A1Z5R3A8	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	EnsemblPlants:OQU77925	ProteinID:OQU77925
ProteinID:OQU77925.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF467	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
SMART:SM00508	EnsemblPlantsGene:SORBI_3009G122800	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI000B8BA058	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:47495402..47510666

Molecular Weight (calculated)

83414.0 Da

IEP (calculated)

8.571

GRAVY (calculated)

-0.636

Length

754 amino acids

Sequence
(BLAST)

001: MVIPGAGAEP RRPRSARYAE KGYPNYAEHD QCPAPRWRSG VTGGRANKPE ARRGRKRGLG DAAAEDVVVA EGKAPPPILQ REEEAAQDQG RKRRMTDAAA
101: SVAAAGKVFP LIADEGDEEV EVSATEGGGD ERGAAGVCSK NPRLRVMKTL RAFSTNYLHF VQEEQRRAES VRQELKACRT LKRQMPVKYG KTKSLAKQHV
201: KGGPSGSTRG RKPKNRNNQH NGGYQEAKQP SKRPDLKALT KMRKDGAILY QDKRIGHLPG TEVGDQFYSR AEMVALGIHS HWMKGIDYMG MEYRDKKGCE
301: NFTFPLAICI VMSGAYEDDV DNADEIIYTG QGGNNWLGNR RQKAEQTLLR GNLALKNSKD NGNPVRVIRG HIEKNSYSGK IYTYDGLYKV VDYCQEKGVQ
401: GHLVYKYRLK RLEGQPPLTT SQVTPLTTSQ VLFAHGDVPM TISELPGLVC EDISNGQENF RIPATNLVDN PPIPPSGFVY SKLLQIPNDI EIPIDSTGCD
501: CSEDCSSSKN CSCAERNGSD LPYVSTQRKS SKHNGSKHNS IGRLVEPKAV VYECGTNCKC HCNCVNRTSQ QGLKYRLEVF KTKSKGWGVR TWDTILPGAL
601: ICEYTGVLRR TTEVEGLLEN NYIFDIDCLE TMEGLDGREQ RAGSELHMAS LHSEHDAEMA SRTPEYCIDA GSVGNVARFI NHSCQPNLFI QCVLSSHSNI
701: KLAKVMLFAA DTIPPLQELS YDYGYRLDSV TGADGNIVKL ACHCGASNCR KRLY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.