CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0362900-01	Rice	mitochondrion, nucleus	61.58	38.11
EER96634	Sorghum	nucleus	78.42	35.87
Zm00001d005650_P001	Maize	plastid	75.79	33.21
TraesCS5D01G197700.2	Wheat	plastid	63.51	31.92
HORVU5Hr1G057440.1	Barley	plastid	64.04	31.38
TraesCS5B01G190000.1	Wheat	plastid	62.28	31.11
TraesCS5A01G194500.1	Wheat	plastid	62.46	30.72
EES05802	Sorghum	nucleus	38.07	27.57
EES13797	Sorghum	nucleus	53.68	27.06
OQU88147	Sorghum	nucleus	32.81	26.95
EES13798	Sorghum	nucleus	57.72	26.11
OQU77925	Sorghum	nucleus	34.39	25.99
EES19725	Sorghum	nucleus	30.7	25.96
EES12588	Sorghum	nucleus	40.0	25.59
EER96294	Sorghum	nucleus	31.4	25.21
EES14036	Sorghum	nucleus	28.25	24.17
EES01635	Sorghum	nucleus	31.4	24.12
OQU78645	Sorghum	nucleus	31.05	23.73
EES01534	Sorghum	nucleus	14.04	23.6
EER96081	Sorghum	nucleus	33.33	22.89
EES10399	Sorghum	nucleus	32.28	22.47
TraesCS5A01G197900.1	Wheat	nucleus	37.72	21.67
TraesCS5B01G185700.3	Wheat	nucleus	41.05	21.1
OQU80395	Sorghum	nucleus	21.05	20.24
HORVU5Hr1G041830.2	Barley	nucleus, plastid	40.53	18.77
TraesCS5D01G193000.2	Wheat	nucleus	36.49	18.52
OQU85329	Sorghum	nucleus	17.19	14.45
EES15150	Sorghum	nucleus	18.42	14.21
EES13161	Sorghum	nucleus	17.89	12.94
KXG30908	Sorghum	nucleus	20.7	7.41

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	UniProt:A0A1Z5RA02	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	EnsemblPlants:OQU80399	ProteinID:OQU80399
ProteinID:OQU80399.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
EnsemblPlantsGene:SORBI_3007G121800	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000B8B983B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:52298173..52300462

Molecular Weight (calculated)

63376.8 Da

IEP (calculated)

8.622

GRAVY (calculated)

-0.452

Length

570 amino acids

Sequence
(BLAST)

001: MKNRLEGSLQ RSVSGWKIKG KRSTREGKKV PRAVVDDKMQ NRLDGSSQPS VPSGSHHKQP GDHIDARSKV RKLLQLYRVT CQKLTQVEVQ GNPIVGRIYL
101: EAAKIVKKDP IYAKLGAIVG NIPGVEVGDE FYYRIELAIV GLHRLHQGGI DTSKVNGVPI AISVVASGGY RDELSSSGEL IYTGSGGKAG GNKDGDDQKL
201: EWGNLALKNC IETKTPVRVI HGFKGQNRSE FGKETSTFTY DGLYEVVECW REGPKGGMVF KYKLWRIAGQ PKLTLHVVKA IRKSKSREGL CLPDISQGSE
301: RIPICVINTV DDMRLAPLKY ITKLTYPTWC EIVPQNGCNC TNHCSDTIRC SCAWKNGGEI PFNCDNAIVK AKRLIYECGP WCRCPPTCYN RVSQHGVKIP
401: LEIFKTGKTG WGVRSLSSIS SGSFICEYTG ELLKGEEAEN RQNDEYLFDI GRNYYDEELW EGIPPVVDVQ SSTSSSGTMK GFTIDGAECS NVGRFINHSC
501: SPNLYAQNVL WDHGNMKMPH IMLFAVENIP PLQELTYHYN YKVGSVHDEN GNEKVKHCYC GASACRGRLY

Best Arabidopsis Sequence Match ( AT2G22740.2 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.