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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G314400.1 Wheat cytosol 41.57 68.39
KXG20108 Sorghum cytosol 10.51 67.34
TraesCS3A01G316900.1 Wheat cytosol 36.47 65.77
TraesCS3B01G349800.1 Wheat cytosol 29.57 65.68
OQU78670 Sorghum cytosol 54.9 65.42
EES16599 Sorghum extracellular 66.51 65.38
TraesCS3B01G349500.1 Wheat cytosol 37.88 65.36
TraesCSU01G070900.1 Wheat endoplasmic reticulum, plasma membrane 64.47 64.78
TraesCS3D01G314300.4 Wheat cytosol 55.22 64.41
TraesCS6D01G398800.1 Wheat endoplasmic reticulum, golgi 64.08 64.33
HORVU3Hr1G076910.3 Barley extracellular, golgi 64.71 64.3
EES15626 Sorghum nucleus 62.43 64.04
TraesCS3A01G316800.1 Wheat endoplasmic reticulum, extracellular 50.12 63.96
TraesCS3B01G349600.2 Wheat endoplasmic reticulum, extracellular 29.49 63.41
TraesCS4A01G477600.1 Wheat extracellular, plasma membrane 16.47 63.25
KXG22917 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 9.49 61.42
EES15625 Sorghum mitochondrion 16.47 61.05
TraesCS4A01G477700.1 Wheat cytosol, plastid 20.16 59.22
Os11t0555300-00 Rice cytosol, plasma membrane 56.94 58.6
Os05t0365300-01 Rice cytosol 40.24 58.56
KXG22916 Sorghum cytosol 14.04 56.83
OQU77400 Sorghum endoplasmic reticulum 22.59 32.4
EES19322 Sorghum endoplasmic reticulum, extracellular, plasma membrane 22.27 26.74
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1W0VZX7ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARC
EnsemblPlants:OQU87674ProteinID:OQU87674ProteinID:OQU87674.1InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364
PANTHER:PTHR23155PANTHER:PTHR23155:SF876EnsemblPlantsGene:SORBI_3003G317300SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI0009DC8AD7
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:64501889..64505748
Molecular Weight (calculated)
144877.0 Da
IEP (calculated)
7.112
GRAVY (calculated)
-0.136
Length
1275 amino acids
Sequence
(BLAST)
0001: MADVALAGLR WVVSPIVKKL LAEASTYLSV DMARELQELE TTVLPQFDLV IEAAEKSPHR DKLKAWLQQL KEAFYDAEDL LDEHEYNLLK RKAKSGKDSV
0101: LGEDASSMKS TILKPFQAAT SRARNLLPDN RRLIRKLHEL KDILAKAKDF RELLGLPTAT PALPVPTTAI PPATTTSLPT SKVDILLNNS TAPEASSSRF
0201: SGLAIIGAGG MGKSTLAQYV YNDKRVEEYF DVRMWVCISR KLDIHHHTRE IIECAAKGEC PRLGSLDTLH YKLKDILEKS QRFLLVLDDV WFQESDNETE
0301: WEQLVAPLIS QQAGSKVLIT SRRDTLPAAL FCKQVIRLGN MEDAEFLALF KHHAFSGVEI EDQLLRLKLE QTAEKIAKRL GQSPLAAKVL GSRLSRKKDV
0401: SEWNATLKID NLSEPRRALL WSYEKLDPRT QRCFLYCSLF PKGHKYNIDE MVHLWVAEGL VDSYKLRRRM EDVATEYFNE MVCGSFFQLV SERYMGSWYV
0501: MHDLLHDLAE SLAREDCFRL EDDKVTEIPC TIRHLSVRVE SMEKHRQIIH KLHHLRTVIC IDPLIDDASD LFDKILQHLK KLRVLYLSFY NSSKLPESVG
0601: ELKHIRYLNL IRTLVSELPK SLCTLYHLQF LLLNAKVKSL PNKLCNLSKL HRLEGYDSFS KHRLYERPLC QIPNIGKLTS LQHLHEFSVH KEKGYELQQL
0701: KDLNELAGCL TIKNLENITG KDEALESKLY QKNRLKELQL VWSGEKDMDA EDSLHLDILE GLKPPPQLSG LAVIGYKSGS YPSWLHEHSY FESLGSFKLA
0801: DCSVLEGLPL DSELFWHCSN LRIDNVPNFK TLSCLPTGLT RLSIHRCPLL MFVTKKELEQ HDLRENMITD YLASKLASLW EVRSRIRSVL SEEHSSLKQL
0901: ATLIDDDISE HLRIINMDPV HEKRDGLFVK EDIIRAWLCC HEQRMRFIYG RSIALPLVPA SGLRYLGLDS CSITDGALAA CLGGLASLET LVLDKIMTLT
1001: ALPSEGVFKH LRKLDYLFIS SCWCLRSLGG LRAAASLRES RFICCPCLEL ARGAELLPLS LVKLFISGCM LAADSFGNGL PQLNGLSMFG CRSTPSLSIT
1101: HLTSLKELSL GNFPDLCFLE GLSSLYLLSL HLTEVPKLSV EFISQFRVQR SLYVSSTELL NHMLMAEGFT IPTFLCLENC KESSVTFEES ASFSSVKHLR
1201: LCLCEMKSLP GNLKCFSSLE ELDIHACPNI SSLPDLPSTL QRIYIWDCEL LKESCRAPDG ESWPKIAHIR WKEFR
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.