CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042272_P003	Maize	nucleus	89.34	92.26
Os01t0927000-01	Rice	nucleus	80.55	84.31
TraesCS3D01G433900.1	Wheat	nucleus	79.39	79.86
TraesCS3B01G475200.1	Wheat	nucleus	75.5	79.76
TraesCS3A01G441200.1	Wheat	nucleus	78.96	79.42
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	82.71	78.85
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	78.82	71.41
GSMUA_Achr8P00500_001	Banana	extracellular	25.65	65.2
VIT_14s0068g01090.t01	Wine grape	nucleus	47.84	63.24
OQU77925	Sorghum	nucleus	62.54	57.56
KRG94709	Soybean	nucleus	24.64	56.81
GSMUA_Achr8P00490_001	Banana	nucleus	28.24	54.14
Bra006226.1-P	Field mustard	nucleus	46.11	53.51
CDX70530	Canola	nucleus	46.4	53.4
CDX78549	Canola	nucleus	46.25	53.15
Solyc02g094520.2.1	Tomato	nucleus	51.73	53.03
AT5G13960.1	Thale cress	nucleus	46.69	51.92
KRH20251	Soybean	nucleus, plastid	49.28	51.66
KRH06819	Soybean	nucleus	51.3	49.44
OQU80399	Sorghum	nucleus	26.95	32.81
EES19725	Sorghum	nucleus	25.79	26.56
EES14036	Sorghum	nucleus	24.93	25.98
EER96294	Sorghum	nucleus	25.65	25.07
EES01635	Sorghum	nucleus	26.37	24.66
OQU78645	Sorghum	nucleus	26.08	24.26
EES01534	Sorghum	nucleus	11.82	24.19
EER96081	Sorghum	nucleus	27.52	23.01
EES05802	Sorghum	nucleus	25.5	22.49
EES10399	Sorghum	nucleus	25.65	21.73
EES12588	Sorghum	nucleus	26.37	20.54
EES13797	Sorghum	nucleus	28.82	17.68
EES13798	Sorghum	nucleus	29.39	16.19
EER96634	Sorghum	nucleus	28.67	15.97
OQU85329	Sorghum	nucleus	14.84	15.19
EES15150	Sorghum	nucleus	15.85	14.88
OQU80395	Sorghum	nucleus	11.53	13.49
EES13161	Sorghum	nucleus	14.84	13.07
KXG30908	Sorghum	nucleus	18.44	8.04

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	EntrezGene:8081297	UniProt:A0A1W0W183	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0042393	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
EnsemblPlants:OQU88147	ProteinID:OQU88147	ProteinID:OQU88147.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884
PANTHER:PTHR22884:SF390	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	SMART:SM00508	EnsemblPlantsGene:SORBI_3003G411400	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0001A84ABA	RefSeq:XP_002456885.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:71866620..71875094

Molecular Weight (calculated)

76672.7 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.553

Length

694 amino acids

Sequence
(BLAST)

001: MAKVDSVAPV PSPTFMDAAP LTLPPPLVVE ELVLRRSARC LNRPTRPSYA DQEPPKKPGG RGRGKRKRDE EKPELAAAQQ GAKSPGRKYS KVEAGERKPM
101: PVIAAVPVSC AGVATEDDAM GTGKSAKLRV KETLRAFNSH YLHFVQEEQK RAQAALQEIE AKTKSGLKRQ TKGGKKKSSK QQAEAEEKEK RPSKRPDLKA
201: ITKMQEMNAV LYPEKRIGHL PGIDVGDRFY SRAEMVVLGI HSHWLNGIDY MGMKYQGKKE YEKLTFPLAT CIVMSGIYED DLDKADEIIY TGQGGNDLLG
301: NHRQIGSQQL TRGNLALKNS RYNGNPVRVI RGHLSKNSYT GKIYTYDGLY KVVHDWVQTG VQGHVVFKYK LKRLEGQPSL TTSEVRFTRA EAPTTISELP
401: GLVCDDISGG QENIPIPATN LVDDPPVPPS GFTYLKSLKI PKDIKIPSSI IGCDCEGDCA TNKNCSCAQR NGSDLPYVSH KNIGRLVEPK AVVFECGANC
501: SCNHDCVNRT SQQGLQYRLE VFKTASKGWG VRTWDTILPG APICEYTGVL RRTEDLDGSQ NNYCFDIDCL QTMKGLDGRE KRAGSEMHLP NLHPEDDSDA
601: PPAPEYCIDA SSIGNFARFI NHSCQPNLFV QCVLSSHNDV KLAKVTLFAA DTILPLQELS YDYGYRLDSV VGPDGKIVKL PCHCGAPDCR KRLY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.