Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- endoplasmic reticulum 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0395900-02 | Rice | nucleus | 72.83 | 88.32 |
| TraesCS4D01G149700.1 | Wheat | nucleus | 70.03 | 85.09 |
| Zm00001d029426_P024 | Maize | nucleus | 77.8 | 85.06 |
| HORVU4Hr1G039020.13 | Barley | nucleus | 69.25 | 84.47 |
| TraesCS4A01G149000.1 | Wheat | nucleus | 68.79 | 83.43 |
| TraesCS4B01G164500.1 | Wheat | nucleus | 69.25 | 80.94 |
| GSMUA_Achr6P10170_001 | Banana | nucleus | 59.78 | 71.56 |
| GSMUA_Achr10P... | Banana | nucleus | 53.26 | 68.74 |
| VIT_07s0031g00640.t01 | Wine grape | nucleus | 57.3 | 66.85 |
| KRH77000 | Soybean | nucleus | 55.43 | 65.62 |
| AT4G36980.4 | Thale cress | nucleus | 56.37 | 65.29 |
| KRH28473 | Soybean | nucleus | 54.81 | 64.42 |
| PGSC0003DMT400010353 | Potato | nucleus | 55.9 | 64.17 |
| Solyc02g090850.2.1 | Tomato | nucleus | 55.9 | 64.17 |
| CDX75625 | Canola | nucleus | 54.35 | 63.99 |
| Bra011736.1-P | Field mustard | nucleus | 54.19 | 63.92 |
| CDX69275 | Canola | nucleus | 49.38 | 54.36 |
Protein Annotations
| EnsemblPlants:OQU92461 | EnsemblPlantsGene:SORBI_3001G347300 | InterPro:SWAP_N_domain | ncoils:Coil | PANTHER:PTHR13161 | PANTHER:PTHR13161:SF4 |
| PFAM:PF09750 | ProteinID:OQU92461 | ProteinID:OQU92461.1 | SEG:seg | SMART:SM01141 | UniParc:UPI000B8BA869 |
| UniProt:A0A1Z5S966 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:63666144..63672028
Molecular Weight (calculated)
74481.4 Da
IEP (calculated)
10.409
GRAVY (calculated)
-1.116
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MWHEARRSDR KVHDLMDAAR RRAQRRAAYL ARRRSDPQQA LQVSGTRCRV HRDDALYQAT EDQQGLCVPR PLSPSFLLSV RCGAVRCLVA AEALLVSWVI
101: LCELKVYTVI THDGDCGAQS RIEPWHCQFS MMKHSLLSPT KWIFSLVKTF SLLKIGNDDL FSSLVCRYSF TMLSCRIPWN GKQDVLIDRF DGRALLDFIR
201: DSSSRPFRVQ EKSEEEEELE EFVNFERYRD LIKHRRRGFS DEAGLQHVVQ ELEAKALLPF SFDKPQSSQP PASKGAYSQV GYSYKGEGNE ESEDLDSDDD
301: DEDEEDEDDD KDFSSDDSSD ERMESIAKEF GIKRYNWLVY MDKKNKEEEK RQKEIVKGDR SIKKLSRRER RKASQIEREK EREAARSVGR VSYRDPYRDQ
401: RRSPSYEAYS RGRRSRSRSR SRSPSHSRRH GRGMHAESNY RSKQKAPRVE YITEFGGSDD TSEPKVSGIS PPSSPIRIDI PNRLSGGQIL EALHSDPASS
501: LSVEQERTAK LLKPPPSTSS ALAKLSKGAS GGTGKTPQTE KKETPQERLK RIMSKQLNKQ IKKDTAAEIA KKREQERQRK EKLAEVGRYR HRSRSRSLSQ
601: SPPRRRQYSR SRSRSRSPRR YRSRSLSSSR SPSRSPRYRS RSRH
101: LCELKVYTVI THDGDCGAQS RIEPWHCQFS MMKHSLLSPT KWIFSLVKTF SLLKIGNDDL FSSLVCRYSF TMLSCRIPWN GKQDVLIDRF DGRALLDFIR
201: DSSSRPFRVQ EKSEEEEELE EFVNFERYRD LIKHRRRGFS DEAGLQHVVQ ELEAKALLPF SFDKPQSSQP PASKGAYSQV GYSYKGEGNE ESEDLDSDDD
301: DEDEEDEDDD KDFSSDDSSD ERMESIAKEF GIKRYNWLVY MDKKNKEEEK RQKEIVKGDR SIKKLSRRER RKASQIEREK EREAARSVGR VSYRDPYRDQ
401: RRSPSYEAYS RGRRSRSRSR SRSPSHSRRH GRGMHAESNY RSKQKAPRVE YITEFGGSDD TSEPKVSGIS PPSSPIRIDI PNRLSGGQIL EALHSDPASS
501: LSVEQERTAK LLKPPPSTSS ALAKLSKGAS GGTGKTPQTE KKETPQERLK RIMSKQLNKQ IKKDTAAEIA KKREQERQRK EKLAEVGRYR HRSRSRSLSQ
601: SPPRRRQYSR SRSRSRSPRR YRSRSLSSSR SPSRSPRYRS RSRH
001: MWHEARRSEK KVHDMMDAAR KRAQRRAIYL AKRRGDPIQS IQAVGSRYRV FRDDGLYQAT EDQQGLIPWN GKQDVMIDRF DGRALLDFVR EAGSRSVRPH
101: KKTEEEEELE EFVNFERYRD LIKHRRRGFS DEEGLQHVHQ ELEAKLAAPF LGTRTQPAQP PANKGTYSQV GFSYAGNGKD NSLDADEDDV DDDEDDEDEE
201: EEFDSNDSDD EGMETIAKQF GIKRYGWLVY MDKKAKEEEK RQKELIKGDP SIKKLSRKER RKVSRIERDR ERETSRSVGR QIIHHDPYRE SRRSPTYEAY
301: PRSRRSRSRS RSYSPSYSRR NGRGDHSDEI SKPKIEYITE FGGGSGDMRS PKFEGYSPPR SPPSQSDLLS RPSPGRILEA LHVDPASDIS LEKDKVAKPA
401: KSTVSTSTAL AKLSKVAGTS SSKQSQAEKK ETPQERLKRI MNKQLTKQIK KDSATETAKK REQERQRLEK LAETSRLSRN RQRSRSRSIS RSPPPRLLIK
501: LSFLLRD
101: KKTEEEEELE EFVNFERYRD LIKHRRRGFS DEEGLQHVHQ ELEAKLAAPF LGTRTQPAQP PANKGTYSQV GFSYAGNGKD NSLDADEDDV DDDEDDEDEE
201: EEFDSNDSDD EGMETIAKQF GIKRYGWLVY MDKKAKEEEK RQKELIKGDP SIKKLSRKER RKVSRIERDR ERETSRSVGR QIIHHDPYRE SRRSPTYEAY
301: PRSRRSRSRS RSYSPSYSRR NGRGDHSDEI SKPKIEYITE FGGGSGDMRS PKFEGYSPPR SPPSQSDLLS RPSPGRILEA LHVDPASDIS LEKDKVAKPA
401: KSTVSTSTAL AKLSKVAGTS SSKQSQAEKK ETPQERLKRI MNKQLTKQIK KDSATETAKK REQERQRLEK LAETSRLSRN RQRSRSRSIS RSPPPRLLIK
501: LSFLLRD
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); /.../72 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink). [Source:TAIR;Acc:AT4G36980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.