Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0689866-00 | Rice | extracellular | 3.66 | 1.7 |
| Os05t0250600-00 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 1.22 | 0.52 |
| Os01t0149500-01 | Rice | mitochondrion, nucleus | 6.1 | 0.51 |
| Os01t0149350-00 | Rice | cytosol | 6.1 | 0.51 |
| Os03t0689400-01 | Rice | cytosol | 3.66 | 0.29 |
| Os11t0479100-00 | Rice | plasma membrane | 3.66 | 0.28 |
| Os11t0704100-00 | Rice | cytosol | 3.66 | 0.26 |
| Os11t0676200-00 | Rice | cytosol | 1.22 | 0.18 |
| Os09t0313600-00 | Rice | plasma membrane | 1.22 | 0.1 |
| Os11t0623800-00 | Rice | cytosol | 1.22 | 0.09 |
| Os07t0481400-01 | Rice | cytosol | 1.22 | 0.09 |
| Os02t0456800-01 | Rice | cytosol | 1.22 | 0.09 |
| Os09t0313500-01 | Rice | plasma membrane | 1.22 | 0.09 |
| Os07t0481300-01 | Rice | cytosol | 1.22 | 0.09 |
| Os11t0673600-00 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os12t0199100-01 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0677101-00 | Rice | plasma membrane | 0.0 | 0.0 |
| Os11t0677000-00 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0676800-00 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0676100-00 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os11t0675200-00 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0674400-00 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os11t0673900-00 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os03t0689833-00 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0479400-01 | Rice | cytosol | 0.0 | 0.0 |
| Os10t0394400-01 | Rice | cytosol | 0.0 | 0.0 |
| Os08t0332600-00 | Rice | cytosol | 0.0 | 0.0 |
| Os05t0250700-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4325218 | EMBL:AK243576 | ProteinID:BAA14038.1 | ProteinID:BAB44010.1 | ProteinID:BAF03942.1 |
| ProteinID:BAS70408.1 | ProteinID:EAZ10549.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0043531 | GO:GO:0046872 | InterPro:Metalthion_15p | EnsemblPlantsGene:Os01g0149800 | EnsemblPlants:Os01t0149800-01 |
| UniProt:P94029 | PFAM:PF01439 | PANTHER:PTHR33543 | PANTHER:PTHR33543:SF1 | EMBL:U43530 | UniParc:UPI0000001736 |
| RefSeq:XP_015645115.1 | SEG:seg | : | : | : | : |
Description
METALLOTHIONEIN 2AMetallothionein-like protein type 2. (Os01t0149800-01)
Coordinates
chr1:-:2693231..2695079
Molecular Weight (calculated)
7852.3 Da
IEP (calculated)
4.503
GRAVY (calculated)
-0.099
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MSCCGGNCGC GSGCQCGSGC GGCKMYPEMA EEVTTTQTVI MGVAPSKGHA EGLEAGAAAG AGAENGCKCG DNCTCNPCNC GK
1: MADTGKGSAS ASCNDRCGCP SPCPGGESCR LMMSEASGGD QEHNTCPCGE HCGCNPCNCP KTQTQTSAKG CTCGEGCTCA TCAA
Arabidopsis Description
MT4BAtMT4b [Source:UniProtKB/TrEMBL;Acc:A0A178VZU5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.