Factsheet for Os01t0811300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 17407182

msms PMID: 17407182 doi

F Chen, Y Yuan, Q Li, Z He

National Key laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, The Chinese Academy of Sciences, Shanghai, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0392400-01
Os07t0620200-01
Os09t0463700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Os03t0392400-01	AT5G09540.1	21798944
AT1G73100.1	Os07t0620200-01	AT5G09540.1	21798944
AT1G73100.1	Os09t0463700-01	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01635	Sorghum	nucleus	75.82	75.2
Os05t0490700-01	Rice	extracellular	66.58	72.92
TraesCS3D01G329100.1	Wheat	nucleus	73.37	72.68
TraesCS3B01G367200.1	Wheat	nucleus	73.37	72.68
TraesCS3B01G366900.1	Wheat	nucleus	73.37	72.68
TraesCS3A01G336100.1	Wheat	nucleus	73.51	72.62
Zm00001d043135_P003	Maize	nucleus	75.27	71.12
Os12t0128450-00	Rice	nucleus	46.74	56.03
Os11t0131600-00	Rice	nucleus	49.86	55.27
CDY04931	Canola	cytosol, extracellular, nucleus	5.3	51.32
Bra009408.1-P	Field mustard	nucleus	33.29	47.85
KRH56252	Soybean	nucleus	13.18	45.54
Os11t0602200-01	Rice	nucleus	48.78	44.16
Bra028776.1-P	Field mustard	nucleus	37.36	43.31
Solyc09g082050.2.1	Tomato	nucleus	38.04	43.28
CDY11319	Canola	nucleus	37.77	43.1
Bra005829.1-P	Field mustard	nucleus	37.64	42.95
CDX80930	Canola	nucleus	37.5	42.86
VIT_13s0047g00120.t01	Wine grape	nucleus	41.58	42.74
KRH62706	Soybean	nucleus	38.72	42.73
AT5G04940.2	Thale cress	nucleus	38.72	42.54
KRH13229	Soybean	nucleus	38.45	42.05
AT1G73100.1	Thale cress	nucleus	38.18	42.0
KRH66648	Soybean	nucleus	40.35	41.95
CDX98805	Canola	nucleus	37.23	41.83
Bra009409.1-P	Field mustard	nucleus	37.77	41.8
PGSC0003DMT400077329	Potato	nucleus	38.04	41.73
KRH20576	Soybean	nucleus	38.04	41.6
CDX68245	Canola	nucleus	37.36	41.29
CDY59935	Canola	nucleus	36.96	41.27
CDX96449	Canola	nucleus	36.82	41.25
CDY11129	Canola	nucleus	37.36	41.11
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	17.39	41.03
CDY61331	Canola	nucleus	37.23	40.96
VIT_08s0040g00360.t01	Wine grape	nucleus	40.76	40.71
Bra016018.1-P	Field mustard	nucleus	36.96	40.18
CDX98804	Canola	nucleus	33.02	39.64
Os03t0320400-01	Rice	nucleus	28.67	39.51
Solyc10g077070.1.1	Tomato	nucleus	37.77	38.94
PGSC0003DMT400018512	Potato	nucleus	37.91	38.86
CDY14135	Canola	nucleus	37.23	37.95
KRG95012	Soybean	plastid	24.86	37.5
AT1G17770.1	Thale cress	nucleus	33.02	35.06
CDY26218	Canola	nucleus	31.11	32.81
AT2G24740.1	Thale cress	nucleus	32.61	31.79
CDY66122	Canola	nucleus	30.3	31.23
Os08t0565700-01	Rice	nucleus	24.86	30.81
Os07t0435900-01	Rice	nucleus	28.53	30.7
Os01t0927000-01	Rice	nucleus	26.09	28.96
CDY56214	Canola	nucleus	31.11	28.88
CDX70182	Canola	nucleus	37.64	27.37
Os01t0772150-00	Rice	nucleus	12.09	26.33
Bra025949.1-P	Field mustard	nucleus	30.84	25.42
CDY26221	Canola	nucleus	30.71	25.25
Bra004258.1-P	Field mustard	nucleus	31.25	25.03
Os09t0362900-01	Rice	mitochondrion, nucleus	30.03	24.0
Os04t0544100-01	Rice	nucleus	25.27	22.12
Os08t0400200-00	Rice	nucleus	31.11	19.52
Os02t0708600-01	Rice	nucleus	11.96	15.63
Os02t0621100-01	Rice	nucleus	15.35	15.25
CDY01852	Canola	plasma membrane	33.02	13.09
Os08t0400000-01	Rice	mitochondrion	15.22	12.08
Os08t0399300-00	Rice	nucleus	13.99	11.81
Os04t0692900-01	Rice	nucleus	4.48	7.48
Os02t0708500-01	Rice	cytosol	2.72	4.59
CDX86631	Canola	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:4327359
ProteinID:BAB85235.1	ProteinID:BAB89651.1	ProteinID:BAF06504.1	ProteinID:BAS74875.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	EnsemblPlantsGene:Os01g0811300	EnsemblPlants:Os01t0811300-01	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF384	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
UniProt:Q8RUS3	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI00000A1C63	RefSeq:XP_015622512.1	SEG:seg

Description

SET protein 4, SUVH Histone Methyltransferase 7Similar to SET domain protein SDG111. (Os01t0811300-01)

Coordinates

chr1:+:34480570..34484981

Molecular Weight (calculated)

80098.7 Da

IEP (calculated)

6.446

GRAVY (calculated)

-0.436

Length

736 amino acids

Sequence
(BLAST)

001: MNRESNFMPT PDQDVLEVKP LRTLAPMFPA PLGIDVLNRL TAPPLVFVAP AGQFPGGFGS LNIPAVRSFA AFGGQDASGG KTAGGGDQDA SGGKTAAGGD
101: QDAGRGETAA FGGQETVRGE FVANGTPNVG ASATGPIDAT PISACKSTQP SVISLDDDDN DDDEPYGGNQ TSASGRKIKR PSHLKGYNVS DGLGTDSSNG
201: TKKRPKTSNR KAATDNEISL MPPSSDPREV VEVLLMTFEA LRRRHLQLDE TQETSKRADL KAGAIMLASN LRANIGKRIG AVPGVEVGDI FYFRMELCII
301: GLHAPSMGGI DYMNKFGDED DSVAICIVAA GVYENDDDDT DTLVYSGSGG ISRNSEEKQD QKLERGNLAL ERSLSRKNVI RVVRGYKDPA CLTGKVYIYD
401: GLYKIHESWK ERTKTGINCF KYKLQREPGQ PDAVAIWKMC QRWVENPAAR GKVLHPDLSS GAENLPVCLI NDVNSEKGPG HFNYITQVKY LKPLRSMKPF
501: QGCRCTSVCL PGDTSCDCAQ HNGGDLPYSS SGLLVCRKLM VYECGESCRC SINCRNRVAQ KGVRIHLEVF RTTNRGWGLR SWDPIRAGSF ICEYVGEVVD
601: DTKVNLDGED DYLFRTVCPG EKTLKWNYGP ELIGEHSINI SADTFEPLPI KISAMKMGNV ARFMNHSCNP NTFWQPVQFD HGEDGYPHIM FFALKHIPPM
701: TELTYDYGDI GCESRGVGSR AKNCLCGSSN CRGFFS

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.