Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
plasma membrane: 18260611
extracellular: 19038476
extracellular: 19226311
extracellular: 24083427
nucleus: 26035336
plastid: 27992503
msms PMID: 26035336 doi
M Li, X Yin, K Sakata, P Yang, S Komatsu
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 19226311 doi
WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES04187 Sorghum extracellular 59.43 60.14
TraesCS3A01G471700.1 Wheat extracellular 51.55 58.7
TraesCS3A01G472100.1 Wheat extracellular 58.23 58.65
TraesCS3B01G515200.1 Wheat extracellular 56.09 57.32
TraesCS3B01G514800.1 Wheat golgi 54.89 57.21
TraesCS3B01G515300.1 Wheat extracellular 56.8 57.21
TraesCS3D01G467900.1 Wheat extracellular 55.37 57.0
TraesCS3D01G467300.1 Wheat extracellular 54.65 56.82
TraesCS3D01G467700.1 Wheat extracellular 56.56 56.7
TraesCS3D01G467600.1 Wheat extracellular, vacuole 55.13 56.62
TraesCS3D01G405900.1 Wheat extracellular 56.09 56.49
TraesCS3A01G472000.1 Wheat extracellular 56.32 56.46
EES04186 Sorghum extracellular 55.37 55.64
TraesCS3A01G471900.1 Wheat extracellular, golgi 53.22 55.61
TraesCS3D01G467500.1 Wheat extracellular, golgi 53.46 55.58
Zm00001d011903_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 56.56 55.5
TraesCS3B01G515100.1 Wheat golgi 54.18 55.5
TraesCS3A01G472300.1 Wheat extracellular, vacuole 56.09 55.42
TraesCS3B01G445200.1 Wheat extracellular 54.65 55.05
HORVU3Hr1G091680.1 Barley extracellular 54.65 55.05
TraesCS3B01G515500.1 Wheat golgi, vacuole 55.13 54.61
TraesCS3D01G467800.1 Wheat extracellular 26.49 54.41
TraesCS3D01G468100.1 Wheat extracellular, vacuole 54.89 54.37
TraesCS3B01G514900.1 Wheat extracellular 51.55 53.47
HORVU1Hr1G088620.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plastid 54.18 51.95
HORVU3Hr1G100350.2 Barley plastid 54.42 51.82
HORVU3Hr1G100410.1 Barley endoplasmic reticulum, mitochondrion, plastid, vacuole 53.22 51.5
TraesCS3D01G467400.1 Wheat cytosol, plastid 23.63 50.51
TraesCS3A01G411700.1 Wheat plastid 55.85 46.71
HORVU3Hr1G100440.1 Barley cytosol, plastid 20.29 46.45
Os01t0937200-01 Rice extracellular 38.66 40.3
Os01t0937000-01 Rice extracellular 37.71 40.0
GSMUA_Achr8P22010_001 Banana extracellular 31.98 36.61
Os01t0937800-00 Rice extracellular 36.99 35.71
Os01t0936900-00 Rice endoplasmic reticulum, plasma membrane 35.56 34.81
Os01t0937500-01 Rice extracellular 36.52 34.54
Os01t0937600-01 Rice extracellular 34.37 32.58
Os05t0403000-01 Rice extracellular 30.07 28.83
Os05t0402900-01 Rice extracellular 29.83 28.6
Os05t0403100-00 Rice extracellular 23.39 28.08
Os05t0403300-01 Rice golgi 29.12 26.81
CDY19949 Canola plasma membrane 24.58 25.56
Bra036172.1-P Field mustard extracellular, plasma membrane 24.58 25.56
CDY00058 Canola extracellular, plasma membrane 24.34 25.31
AT5G48430.1 Thale cress extracellular, plasma membrane 24.11 24.88
Os01t0937050-01 Rice extracellular 10.5 10.38
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:4326530MEROPS:A01.974EMBL:AK105806InterPro:Aspartic_peptidase_A1
ProteinID:BAB89708.1ProteinID:BAF07246.1ProteinID:BAS76115.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0005975GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016787GO:GO:0016798GO:GO:0019538GO:GO:0030163GO:GO:0045493InterPro:IPR021109
InterPro:IPR033121EnsemblPlantsGene:Os01g0937100EnsemblPlants:Os01t0937100-01InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543
PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF289InterPro:Peptidase_aspartic_dom_sfUniProt:Q8S1V0SUPFAM:SSF50630
SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI00000A5A88RefSeq:XP_015629518.1InterPro:Xylanase_inhibitor_I-like
SEG:seg:::::
Description
Similar to Xylanase inhibitor precursor (Xylanase inhibitor TAXI-I). (Os01t0937100-01)
Coordinates
chr1:-:41142013..41143416
Molecular Weight (calculated)
43789.2 Da
IEP (calculated)
9.453
GRAVY (calculated)
0.180
Length
419 amino acids
Sequence
(BLAST)
001: MPPRNGNLVL AAAAAALLVL LASPPSCSAA APRRRDPVVV PVTRDPATSL YTIPVRYYDN LVVDLAGPLV WSTCAADHLP ASLSCQDPTC VVANAYRAPT
101: CKVTGGGGDC SKNVCTAYPY NPVTGQCAAG NLAHTRFIAN TTDGKNPLIQ VSVKAVAACA PKRLLARLPR GATGVAGLAA SGLALPAQVA SSQGVAGRFL
201: LCLPRLGYGQ GVAIFGGGPI YLGEGLPDFT TTLDYTPLVA KRDNPGYYVT ANAIALDDAR LPLPSGALAA GGVALRTAVP FGQLRPDVFR PFVREFEKGL
301: NRSDAKVAAV APFPLCYRAS MLGNTRIGYF VPAVRLMLAG GKNYTMTGTN SMVDVKGGKA CLAFVEMKSG DAASSPAVIL GGFQMENMLL QFDSEKKRLG
401: FARLPFYTSC SNFNFTKTQ
Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.