Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05382 | Sorghum | nucleus | 44.07 | 54.55 |
| Zm00001d051007_P001 | Maize | nucleus | 42.94 | 53.15 |
| Os05t0301600-01 | Rice | nucleus | 33.9 | 36.36 |
| Zm00001d004516_P001 | Maize | cytosol | 35.59 | 30.58 |
| Zm00001d018722_P001 | Maize | cytosol | 35.59 | 30.58 |
| Zm00001d025415_P001 | Maize | mitochondrion, plastid | 36.16 | 29.63 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4329900 | EMBL:AK065609 | ProteinID:BAD19343.1 | ProteinID:BAD22169.1 | ProteinID:BAF09270.1 |
| ProteinID:BAS79626.1 | ncoils:Coil | GO:GO:0000164 | GO:GO:0003674 | GO:GO:0004864 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009966 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0032515 | GO:GO:0043666 | EnsemblPlantsGene:Os02g0602300 | EnsemblPlants:Os02t0602300-01 | PFAM:PF04979 | InterPro:PPI-2 |
| PANTHER:PTHR12398 | PANTHER:PTHR12398:SF24 | UniProt:Q6K5F6 | UniParc:UPI0000375826 | RefSeq:XP_015625938.1 | RefSeq:XP_015625939.1 |
| SEG:seg | : | : | : | : | : |
Description
Similar to Myelin transcription factor 1 (MYT1) (MYTI) (Proteolipid protein binding protein) (PLPB1). (Os02t0602300-01);Similar to Myelin transcription factor 1 (MYT1) (MYTI) (Proteolipid protein binding protein) (PLPB1). (Os02t0602300-02)
Coordinates
chr2:+:23572965..23575418
Molecular Weight (calculated)
20929.1 Da
IEP (calculated)
3.987
GRAVY (calculated)
-1.851
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAKESKKSR DRGRDRVKWN EENLNDIEST KPVREKITEP KTPYHSMIDE DDGTVSPKRT IEESVDKSTH ADAIKTALME AVSSGKLSAR EHLESCSNEE
101: EEEEEEEEEE EEEEEEEEEE QEEEEEEEEE EEEEEEEEEV AIKQGTDFEE QRKAHYDEFR KMKELRRRGT PSQEGDE
101: EEEEEEEEEE EEEEEEEEEE QEEEEEEEEE EEEEEEEEEV AIKQGTDFEE QRKAHYDEFR KMKELRRRGT PSQEGDE
001: MTEPKRGRVQ WDEANIVEIE SNKPVRQKIT EPKTPYHPMM DDDGSLSPRG RAFDECVDDM QRAEELRNVL NDAAASSSRN SSQGSGGGGW SSSDEEEEEA
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I
Arabidopsis Description
I-2Protein phosphatase inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.