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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G416100.1 Wheat plasma membrane 83.55 84.33
EER95493 Sorghum plasma membrane 83.36 84.3
TraesCS4B01G316900.1 Wheat plasma membrane 83.18 83.96
TraesCS4D01G313600.1 Wheat plasma membrane 82.81 83.58
Os10t0444700-02 Rice plasma membrane 80.41 80.41
Os08t0564000-01 Rice plasma membrane 72.64 73.6
Os10t0444600-00 Rice golgi, plasma membrane 51.57 73.04
Os03t0150800-01 Rice endoplasmic reticulum, golgi, plasma membrane 71.16 72.92
Os04t0186400-01 Rice plasma membrane 72.27 72.68
Os03t0136400-01 Rice plasma membrane 70.61 72.62
Os03t0150600-01 Rice plasma membrane 70.24 72.11
HORVU4Hr1G080310.1 Barley plastid 74.12 71.86
Os04t0185600-00 Rice plasma membrane 72.09 71.17
Os01t0741300-00 Rice mitochondrion 13.68 66.67
Os04t0508751-00 Rice mitochondrion 13.31 64.86
Os04t0186800-00 Rice plasma membrane 56.38 60.04
Os01t0657100-01 Rice plasma membrane 55.45 54.05
Os06t0325200-01 Rice cytosol 48.8 47.83
Os06t0324800-01 Rice mitochondrion, plasma membrane 49.35 45.88
Protein Annotations
MapMan:24.2.2.6MapMan:25.3.2.1EntrezGene:4331634ProteinID:AAN39053.1ProteinID:AAN87745.1ProteinID:ABF94005.1
EMBL:AK106694ProteinID:BAF10890.1ProteinID:BAS82315.1ProteinID:EAZ25602.1GO:GO:0003674GO:GO:0005215
GO:GO:0005315GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005887GO:GO:0006810
GO:GO:0006817GO:GO:0008150GO:GO:0015293GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfEnsemblPlantsGene:Os03g0150500
EnsemblPlants:Os03t0150500-01PFAM:PF00083PFscan:PS50850PANTHER:PTHR24064PANTHER:PTHR24064:SF262InterPro:Phos_permease
UniProt:Q8H074SUPFAM:SSF103473TIGRFAMs:TIGR00887TMHMM:TMhelixUniParc:UPI00000ADC25RefSeq:XP_015631296.1
SEG:seg:::::
Description
PHOSPHATE TRANSPORTER 12Similar to Phosphate transporter 6. (Os03t0150500-01)
Coordinates
chr3:+:2804141..2805941
Molecular Weight (calculated)
58707.5 Da
IEP (calculated)
7.804
GRAVY (calculated)
0.374
Length
541 amino acids
Sequence
(BLAST)
001: MGRQDQQLQV LNALDAAKTQ WYHFTAIIVA GMGFFTDAYD LFCISLVTKL LGRIYYTDPA SPTPGSLPPN IAAAVNGVAL CGTLSGQLFF GWLGDKLGRK
101: SVYGMTLLLM VICSIASGLS FSHTPTSVMA TLCFFRFWLG FGIGGDYPLS ATIMSEYANK KTRGAFIAAV FAMQGFGILA GGVVTLAMSA GFQAAFPAPA
201: YEVNAAASTV PQADYVWRII LMLGALPAIL TYYWRMKMPE TARYTALVAK DAKQASSDMA KVLQVEIEVE EEKLQDITRG RDYGLFSARF AKRHGAHLLG
301: TAATWFLVDV AYYSQNLFQK DIFTSIHWIP KARTMSELEE VFRISRAQTL IALCGTVPGY WFTVFLIDII GRFKIQLLGF AGMTAFMLGL AIPYHHWTMP
401: GNQVIFVFLY GFTFFFANFG PNATTFIVPA EIFPARLRST CHGISAASGK AGAIIGAFGF LYAAQPQDKA HVDAGYKPGI GVRNALFVLA GCNLVGFLMT
501: WMLVPESKGK SLEEMSGEAD DEEASANGGA TAVNSSGVEM V
Best Arabidopsis Sequence Match ( AT5G43350.1 )
(BLAST)
001: MAEQQLGVLK ALDVAKTQLY HFTAIVIAGM GFFTDAYDLF CVSLVTKLLG RIYYFNPESA KPGSLPPHVA AAVNGVALCG TLSGQLFFGW LGDKLGRKKV
101: YGLTLVMMIL CSVASGLSFG HEAKGVMTTL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGVGILAGG FVALAVSSIF DKKFPAPTYA
201: VNRALSTPPQ VDYIWRIIVM FGALPAALTY YWRMKMPETA RYTALVAKNI KQATADMSKV LQTDIELEER VEDDVKDPKQ NYGLFSKEFL RRHGLHLLGT
301: TSTWFLLDIA FYSQNLFQKD IFSAIGWIPK AATMNATHEV FRIARAQTLI ALCSTVPGYW FTVAFIDTIG RFKIQLNGFF MMTVFMFAIA FPYNHWIKPE
401: NRIGFVVMYS LTFFFANFGP NATTFIVPAE IFPARLRSTC HGISAAAGKA GAIVGAFGFL YAAQSQDKAK VDAGYPPGIG VKNSLIMLGV LNFIGMLFTF
501: LVPEPKGKSL EELSGEAEVS HDEK
Arabidopsis Description
PHT1-1Inorganic phosphate transporter 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYM2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.