Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G160900.1 | Wheat | cytosol | 68.89 | 69.75 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 67.65 | 68.84 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 67.65 | 68.33 |
| Zm00001d047214_P001 | Maize | extracellular | 66.42 | 67.76 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 66.17 | 67.68 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 66.91 | 67.58 |
| EER92178 | Sorghum | nucleus | 66.67 | 67.0 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 51.11 | 52.27 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 39.01 | 39.21 |
| GSMUA_Achr10P... | Banana | cytosol | 40.49 | 38.95 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 30.37 | 37.85 |
| AT5G09540.1 | Thale cress | nucleus | 20.49 | 29.64 |
| CDY21586 | Canola | cytosol | 20.74 | 29.07 |
| Os09t0463700-01 | Rice | nucleus | 26.67 | 29.03 |
| CDY69792 | Canola | cytosol | 20.99 | 29.01 |
| Bra009389.1-P | Field mustard | cytosol | 20.99 | 29.01 |
| Os10t0378450-00 | Rice | plastid | 13.58 | 28.21 |
| Bra031921.1-P | Field mustard | cytosol | 24.69 | 27.1 |
| CDY31322 | Canola | cytosol | 24.69 | 26.81 |
| Solyc07g007230.2.1 | Tomato | nucleus | 25.93 | 24.65 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 29.38 | 24.49 |
| KRH42098 | Soybean | nucleus | 25.93 | 23.08 |
| KRH49811 | Soybean | nucleus | 26.42 | 22.72 |
| AT5G64360.7 | Thale cress | nucleus | 25.68 | 22.41 |
| Bra024289.1-P | Field mustard | nucleus | 24.94 | 22.0 |
| KRH10601 | Soybean | nucleus | 26.91 | 21.93 |
| CDX84519 | Canola | nucleus | 24.69 | 21.05 |
| CDY58269 | Canola | nucleus | 25.43 | 20.52 |
| PGSC0003DMT400079004 | Potato | cytosol | 25.43 | 20.16 |
| KRH21766 | Soybean | nucleus | 24.69 | 20.04 |
| CDY46799 | Canola | nucleus | 16.54 | 17.09 |
| Solyc11g006170.1.1 | Tomato | nucleus | 27.16 | 16.95 |
| PGSC0003DMT400073845 | Potato | cytosol | 26.42 | 16.41 |
| Solyc01g105780.2.1 | Tomato | nucleus | 28.4 | 16.04 |
| Solyc11g006140.1.1 | Tomato | nucleus | 23.46 | 15.97 |
| PGSC0003DMT400083794 | Potato | nucleus | 28.64 | 15.61 |
| CDY45966 | Canola | nucleus | 22.22 | 12.1 |
| CDY45473 | Canola | nucleus | 21.98 | 11.9 |
| Bra027007.1-P | Field mustard | nucleus | 21.73 | 11.8 |
| AT1G62970.1 | Thale cress | nucleus | 20.99 | 10.66 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:4333027 | ProteinID:AAP04178.1 | ProteinID:AAR87277.1 | ProteinID:ABF96379.1 |
| ProteinID:ABF96380.1 | ProteinID:ABF96381.1 | EMBL:AK106027 | ProteinID:BAF12198.1 | ProteinID:BAS84534.1 | InterPro:DnaJ_domain |
| ProteinID:EAZ27191.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | EnsemblPlantsGene:Os03g0392400 | EnsemblPlants:Os03t0392400-01 | PFAM:PF00226 | PFscan:PS50076 | PANTHER:PTHR45496 |
| UniProt:Q84R00 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000018CED5 | RefSeq:XP_015631126.1 | RefSeq:XP_015631127.1 |
| SEG:seg | : | : | : | : | : |
Description
Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0392400-01)
Coordinates
chr3:-:15754440..15756106
Molecular Weight (calculated)
42387.9 Da
IEP (calculated)
6.902
GRAVY (calculated)
-0.347
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSGGSGGG GVASGRVQAE RWLEIAGKLL AARDLVGCKR FAERAVEADP LLPGADELLA VTDVLLASQS VLPSGQADPL AVLQLPPSTN PADHAAVSRA
101: YRRLALLLRQ DTNPHPGADV ALSLVHDAYA ILSDPNRRPP PPVAVAVPHA HPGAASHPAA PAAAESPEFW TACPFCSYVH QYQRELVGRA LKCPNESCRK
201: GFVAIEISTP PTIVPGTEMY HCAWGFFPLG YPTSADLNGN WKPFYKMFPW NNAPAGGAGS GGRGGYGGRG GGSAGRQPQN GSARGGSSRG RVKKTTARKK
301: VGAGLKRRSF GGVESGIEPM DGQDGWGEGE EGGDGQAEEV RGININEEAQ STDGATRGHV HARGNVSGGV VDMGTFHLDV DPSEDILGNL QNLPFLRVDN
401: LGRML
101: YRRLALLLRQ DTNPHPGADV ALSLVHDAYA ILSDPNRRPP PPVAVAVPHA HPGAASHPAA PAAAESPEFW TACPFCSYVH QYQRELVGRA LKCPNESCRK
201: GFVAIEISTP PTIVPGTEMY HCAWGFFPLG YPTSADLNGN WKPFYKMFPW NNAPAGGAGS GGRGGYGGRG GGSAGRQPQN GSARGGSSRG RVKKTTARKK
301: VGAGLKRRSF GGVESGIEPM DGQDGWGEGE EGGDGQAEEV RGININEEAQ STDGATRGHV HARGNVSGGV VDMGTFHLDV DPSEDILGNL QNLPFLRVDN
401: LGRML
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.