Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0073g00490.t01 Wine grape cytosol, mitochondrion 68.19 50.19
Zm00001d013680_P002 Maize cytosol 97.96 38.77
TraesCS5A01G373900.1 Wheat cytosol 97.2 38.7
EER91167 Sorghum cytosol 98.22 38.68
TraesCS5D01G383300.1 Wheat cytosol 97.2 38.47
HORVU5Hr1G092820.4 Barley cytosol 97.2 38.43
GSMUA_Achr9P25950_001 Banana cytosol 95.42 38.42
TraesCS5B01G375800.1 Wheat cytosol 97.46 38.42
Zm00001d033217_P002 Maize cytosol 97.71 38.4
Os12t0617900-02 Rice cytosol 97.96 38.16
GSMUA_Achr8P03030_001 Banana cytosol 94.66 37.77
GSMUA_Achr4P22810_001 Banana cytosol 94.66 37.27
Os05t0144400-01 Rice plasma membrane 77.1 34.31
GSMUA_Achr2P12930_001 Banana cytosol 95.67 28.77
Os08t0513000-01 Rice cytosol 12.21 27.27
Os05t0204900-01 Rice cytosol, plasma membrane 25.19 20.5
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:11.3.2.2MapMan:18.4.24.1.7Gene3D:3.60.21.10UniProt:A0A0N7KHQ6
ProteinID:BAS85481.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0006464
GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538
InterPro:IPR029052InterPro:Metallo-depent_PP-likeEnsemblPlantsGene:Os03g0646900EnsemblPlants:Os03t0646900-01PFAM:PF00149PRINTS:PR00114
ScanProsite:PS00125PANTHER:PTHR11668PANTHER:PTHR11668:SF243SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI000393BB95:::::
Description
protein phosphatase with Kelch-like repeat domain 1, grain length 3, Protein phosphatase 54Similar to Serine/threonine protein phosphatase. (Os03t0646900-01)
Coordinates
chr3:-:25042427..25045410
Molecular Weight (calculated)
44101.0 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.220
Length
393 amino acids
Sequence
(BLAST)
001: LSIDQFENEG RRVSYGTPEN ATAARKLLDR QMSINSVPKK VIASLLKPRG WKPPVRRQFF LDCNEIADLC DSAERIFSSE PSVLQLKAPV KIFGDLHGQF
101: GDLMRLFDEY GAPSTAGDIA YIDYLFLGDY VDRGQHSLET MTLLLALKVE YPQNVHLIRG NHEAADINAL FGFRIECIER MGERDGIWTW HRMNRLFNWL
201: PLAALIEKKI ICMHGGIGRS INHVEQIENL QRPITMEAGS VVLMDLLWSD PTENDSVEGL RPNARGPGLV TFGPDRVMEF CNNNDLQLIV RAHECVMDGF
301: ERFAQGHLIT LFSATNYCGT ANNAGAILVL GRDLVVVPKL IHPLPPAITS PETSPEHHIE DTWMQELNAN RPPTPTRGRP QVAANDRGSL AWI
Best Arabidopsis Sequence Match ( AT2G27210.1 )
(BLAST)
0001: MDLDSSMVPE NDQDPIATSE NQSPMEEKEE ASEQQTGSES ESASLTPSLP PPSQQQQQQQ QQPQVTAVVG PRCAPTYSVV NAIIEKKEDG PGPRCGHTLT
0101: AVPAVGEEGT SSYIGPRLIL FGGATALEGN SGGTGTPTSA GSAGIRLAGA TADVHCYDVL SNKWSRLTPY GEPPSPRAAH VATAVGTMVV IQGGIGPAGL
0201: SAEDLHVLDL TQQRPRWHRV VVQGPGPGPR YGHVMALVGQ RYLMAIGGND GKRPLADVWA LDTAAKPYEW RKLEPEGEGP PPCMYATASA RSDGLLLLCG
0301: GRDANSVPLA SAYGLAKHRD GRWEWAIAPG VSPSARYQHA AVFVNARLHV SGGALGGGRM VEDSSSVAVL DTAAGVWCDT KSVVTSPRTG RYSADAAGGD
0401: ASVELTRRCR HAAAAVGDLI FIYGGLRGGV LLDDLLVAED LAAAETTSAA SHAAAAAAAT NTPPGRSPGR YGFSDERTGE LPESAPDAVV LGSPVAPPVN
0501: GDMYTDISTE NAMVPGIRRT SKGVEYLVEA SAAEAEAISA TLAAAKARQV NGEVELPDRD RGAEATPSGK PSLSLIKPDS AVPNSVIPAG VRLHHRAVVV
0601: AAETGGALGG MVRQLSIDQF ENEGRRVSYG TPESATAARK LLDRQMSINS VPKKVVAHLL KPRGWKPPVR RQFFLDCNEI ADLCDSAERI FSSEPTVLQL
0701: KAPIKIFGDL HGQFGDLMRL FDEYGSPSTA GDISYIDYLF LGDYVDRGQH SLETITLLLA LKVEYQHNVH LIRGNHEAAD INALFGFRIE CIERMGERDG
0801: IWVWHRINRL FNWLPLAALI EKKIICMHGG IGRSINHVEQ IENIQRPITM EAGSIVLMDL LWSDPTENDS VEGLRPNARG PGLVTFGPDR VMEFCNNNDL
0901: QLIVRAHECV MDGFERFAQG HLITLFSATN YCGTANNAGA ILVLGRDLVV VPKLIHPLPP AITSPETSPE RHIEDTWMQE LNVNRPPTPT RGRPQNPNDR
1001: GSLAWI
Arabidopsis Description
BSL3Serine/threonine-protein phosphatase BSL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHS7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.