Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0112300-01 | Rice | cytosol | 57.06 | 19.79 |
| Os08t0111300-01 | Rice | plastid | 52.76 | 17.95 |
| Os08t0111800-00 | Rice | cytosol | 47.85 | 16.81 |
| Os08t0111500-00 | Rice | cytosol | 52.76 | 16.14 |
| Os11t0244100-00 | Rice | mitochondrion | 31.9 | 10.88 |
| Os06t0103200-01 | Rice | mitochondrion | 30.67 | 10.85 |
| Os07t0142700-00 | Rice | plastid | 31.29 | 10.74 |
| Os08t0562500-01 | Rice | plastid | 28.22 | 10.34 |
| Os04t0374400-00 | Rice | cytosol | 25.77 | 10.0 |
| Os01t0854000-01 | Rice | plastid | 29.45 | 9.94 |
| Os05t0449200-01 | Rice | plastid | 26.99 | 9.17 |
Protein Annotations
| EnsemblPlants:Os04t0374601-00 | EnsemblPlantsGene:Os04g0374601 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31896 | PANTHER:PTHR31896:SF9 |
| PFAM:PF02458 | ProteinID:BAS88842.1 | ProteinID:CAD40565.2 | SEG:seg | UniParc:UPI00001B10EE | UniProt:Q7XVL2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Transferase domain containing protein. (Os04t0374601-00)
Coordinates
chr4:-:18273669..18274223
Molecular Weight (calculated)
17409.7 Da
IEP (calculated)
5.269
GRAVY (calculated)
-0.218
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMPLLAFA CPSTRGVSLQ DSSRKYRSSC CRPKGIEDWG GGLLDWVLGE SMEVDEMGKF WSRVTQNKPN GPRALEFANF AKPMGGTAIN TGSSPRFDVF
101: GKDFGWGRPA TVRSGGTDKF DGKVTVYEGP TGAGSMSLEV CLTPVALAKL VADEEFMDAV TAP
101: GKDFGWGRPA TVRSGGTDKF DGKVTVYEGP TGAGSMSLEV CLTPVALAKL VADEEFMDAV TAP
001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK
Arabidopsis Description
At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.