Factsheet for Os04t0544100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12588	Sorghum	nucleus	68.37	64.53
TraesCS2D01G389100.1	Wheat	nucleus	66.35	58.12
TraesCS2B01G409600.1	Wheat	nucleus	65.76	57.48
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	66.35	55.36
VIT_16s0013g00310.t01	Wine grape	nucleus	25.45	46.32
Bra005362.1-P	Field mustard	nucleus	22.0	45.23
PGSC0003DMT400054167	Potato	nucleus	23.66	41.29
VIT_16s0013g00650.t01	Wine grape	nucleus	27.71	40.03
Solyc03g093740.1.1	Tomato	nucleus	14.39	39.41
VIT_00s0309g00020.t01	Wine grape	nucleus	33.65	39.03
Solyc03g093720.1.1	Tomato	nucleus	13.2	37.0
PGSC0003DMT400080404	Potato	nucleus, plastid	26.16	36.01
KRG90121	Soybean	nucleus	23.19	35.33
CDX89510	Canola	nucleus	30.8	34.17
CDY25627	Canola	nucleus	30.2	34.05
CDY31670	Canola	nucleus	27.11	31.8
Bra030212.1-P	Field mustard	nucleus	29.73	31.57
CDX84255	Canola	nucleus	26.87	31.35
PGSC0003DMT400080391	Potato	nucleus	16.65	31.18
AT2G22740.1	Thale cress	nucleus	29.01	30.89
AT2G35160.3	Thale cress	nucleus	28.18	29.85
Os12t0128450-00	Rice	nucleus	21.17	28.99
Solyc03g093710.1.1	Tomato	nucleus	28.54	28.64
PGSC0003DMT400092528	Potato	cytosol	7.25	28.5
Os09t0362900-01	Rice	mitochondrion, nucleus	30.8	28.12
Solyc03g093760.1.1	Tomato	nucleus	26.64	28.11
PGSC0003DMT400054154	Potato	nucleus	28.06	27.83
PGSC0003DMT400054163	Potato	extracellular, nucleus	27.47	27.5
Os11t0131600-00	Rice	nucleus	21.52	27.26
Os01t0927000-01	Rice	nucleus	21.4	27.15
Os08t0565700-01	Rice	nucleus	19.02	26.94
Os01t0772150-00	Rice	nucleus	10.82	26.92
Solyc03g093700.1.1	Tomato	nucleus	26.64	26.7
Solyc06g060960.1.1	Tomato	nucleus	33.06	26.35
Os05t0490700-01	Rice	extracellular	21.05	26.34
PGSC0003DMT400068351	Potato	nucleus	33.29	26.32
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	12.6	26.17
PGSC0003DMT400080398	Potato	nucleus	26.99	25.8
Os07t0435900-01	Rice	nucleus	20.81	25.58
Os01t0811300-01	Rice	nucleus, plasma membrane	22.12	25.27
KRH77297	Soybean	nucleus	32.34	25.16
Solyc08g077940.1.1	Tomato	nucleus	30.56	24.78
KRH28192	Soybean	nucleus	32.34	24.59
PGSC0003DMT400067504	Potato	nucleus	30.56	24.34
Os03t0320400-01	Rice	nucleus	15.1	23.78
Os08t0400200-00	Rice	nucleus	31.39	22.51
Os11t0602200-01	Rice	nucleus	21.52	22.26
KRH77260	Soybean	nucleus	12.49	21.56
KRH28232	Soybean	nucleus	11.77	20.25
Os02t0708600-01	Rice	nucleus	10.46	15.63
Os02t0621100-01	Rice	nucleus	13.67	15.52
Os08t0400000-01	Rice	mitochondrion	13.91	12.62
Os08t0399300-00	Rice	nucleus	12.49	12.04
Os04t0692900-01	Rice	nucleus	3.92	7.48
Os02t0708500-01	Rice	cytosol	1.43	2.75

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:4336555	ProteinID:BAF15372.1
ProteinID:BAS90322.1	ProteinID:CAE04343.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	EnsemblPlantsGene:Os04g0544100	EnsemblPlants:Os04t0544100-01	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884
PANTHER:PTHR22884:SF388	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	UniProt:Q7XN04	InterPro:SET_dom
SMART:SM00317	SMART:SM00466	SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000021C798	RefSeq:XP_015633413.1	SEG:seg	:

Description

SET protein 20, SUVH Histone Methyltransferase 5Similar to SET domain-containing protein SET104. (Os04t0544100-01)

Coordinates

chr4:-:27244082..27246792

Molecular Weight (calculated)

90974.4 Da

IEP (calculated)

8.132

GRAVY (calculated)

-0.511

Length

841 amino acids

Sequence
(BLAST)

001: MGIPEVVVPP RAAGPRRYKG LVPWRFQPGF VRPPPVKPPA AAAAVAGGGV AGTPGGKGRG LGASGEGVGS SGGRGDPQSR RCTRSASAKG SGDARSVEEG
101: GPRVAGDDGG SGKSGVAAEG SGFEGLRNGR GGGVGTAAAE DCGLEKSNPD GIVGDADVHL ESGSDARDGE CVSEGLKKPC VNNSNGSSAA DCAPKVKKGN
201: DSGNGGADEC NAAAKSSNLA CPGNNGDETN RKGRKVVLPW RFQVGFKRSF SKAFCSDSES SGPSGTQFYR AQDSSTPCTP ATRSSVRCYA SAHSGVRVSA
301: MRDFSVKGEK ETSTPYKKSK TGMDGPSQGM PKNGVVLARE NIMGSLQNFR LIYRDLLDEE EEKSTEAVIR PDLQAYRIFR ERFITDCDEK KYIGNVPGIK
401: VGDIFHLRVE LCVVGLHRPH RVGVDHIKQE DGTCIAVSIV SYAQSSDIKN NLDVLVYSGA MTAIANQKIE GTNLALKKSM DTNTPVRVIH GFVTHLNGNC
501: QRKKIPTYIY GGLYIVEKYW REKEGNDRYV YMFRLRRMAG QKHIDIQDIL NSGQAESYGG IIIKDISRGL EKIPVSVVNS ISDEYPMPYR YIAHLQYPRN
601: YQPAPPAGCG CVGGCSDSKR CACAVKNGGE IPFNDKGRIL EAKPLVYECG PSCKCPPTCH NRVGQHGLRF RLQVFKTKLM GWGVRTLDFI PSGSFVCEYI
701: GEVLEDEEAQ KRSTDEYLFA IGHNYYDEAL WEGLSRSIPS LQKGPDKDEE AGFAVDASKM GNFAKFINHS CTPNLYAQNV LYDHDDKSVP HIMFFACEDI
801: PPRQELSYHY NYTIDQVHDA NGNIKKKKCL CGSIECDGWL Y

Best Arabidopsis Sequence Match ( AT2G35160.4 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.