Factsheet for Os04t0570000-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
golgi 2
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

nucleus: 14630954

gfp PMID: 14630954 doi

C Chaban, F Waller, M Furuya, P Nick

Institut für Biologie II, Schänzlestrasse 1, D-79104 Freiburg, Germany. christian.chaban@uni-freiburg.de

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002629_P001	Maize	endoplasmic reticulum	86.77	88.14
Zm00001d026083_P001	Maize	endoplasmic reticulum	86.19	87.2
EES12690	Sorghum	endoplasmic reticulum	87.35	86.85
HORVU2Hr1G095130.3	Barley	endoplasmic reticulum	85.02	86.02
TraesCS2B01G418700.1	Wheat	endoplasmic reticulum	84.63	85.63
TraesCS2A01G400600.1	Wheat	cytosol, endoplasmic reticulum, vacuole	84.05	85.04
TraesCS2D01G398200.1	Wheat	endoplasmic reticulum	83.66	84.65
Os02t0675400-00	Rice	endoplasmic reticulum	76.26	81.67
GSMUA_Achr5P10500_001	Banana	endoplasmic reticulum, vacuole	54.67	68.37
VIT_02s0025g04080.t01	Wine grape	endoplasmic reticulum, vacuole	59.73	65.04
KRH27969	Soybean	endoplasmic reticulum, vacuole	59.73	64.36
KRH77492	Soybean	endoplasmic reticulum, vacuole	59.92	63.9
PGSC0003DMT400007849	Potato	cytosol	30.54	63.56
Solyc08g080430.1.1	Tomato	endoplasmic reticulum, vacuole	58.17	62.82
GSMUA_Achr5P10490_001	Banana	plasma membrane, vacuole	59.14	62.68
Bra019782.1-P	Field mustard	endoplasmic reticulum, extracellular	57.39	61.97
CDY66605	Canola	endoplasmic reticulum, extracellular	57.0	61.81
CDY26591	Canola	extracellular, golgi, plasma membrane	55.25	61.74
CDY60267	Canola	extracellular, golgi	56.61	61.52
CDY16028	Canola	extracellular, golgi	56.23	61.1
AT1G12740.4	Thale cress	endoplasmic reticulum, extracellular	56.03	60.25
Bra026956.1-P	Field mustard	extracellular, golgi	37.35	57.66
PGSC0003DMT400014907	Potato	cytosol	42.22	57.56
Solyc08g007900.1.1	Tomato	nucleus	52.33	57.11
Os03t0658800-01	Rice	endoplasmic reticulum	48.44	50.3
Os10t0179200-00	Rice	cytosol	36.19	48.82
Os04t0570500-01	Rice	endoplasmic reticulum, plasma membrane	44.75	47.72
Os11t0289700-01	Rice	plasma membrane	41.83	44.42
Os03t0602300-01	Rice	endoplasmic reticulum	31.71	34.75
Os12t0139300-01	Rice	endoplasmic reticulum, golgi	32.49	33.33
Os11t0143200-01	Rice	endoplasmic reticulum, golgi	32.3	33.13
Os05t0200400-01	Rice	endoplasmic reticulum, mitochondrion, plastid	17.7	32.27
Os03t0227700-01	Rice	endoplasmic reticulum, golgi	31.52	32.02
Os04t0469800-01	Rice	endoplasmic reticulum, golgi	28.6	30.62
Os01t0197100-01	Rice	endoplasmic reticulum	28.6	30.0
Os04t0570600-01	Rice	endoplasmic reticulum	1.56	1.65

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:4336709	MapMan:50.1.13	EMBL:AJ459255	ProteinID:BAF15513.1	ProteinID:BAS90563.1
ProteinID:CAD41584.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0010268	GO:GO:0016020	GO:GO:0016021	GO:GO:0016125	GO:GO:0016132
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0030659	GO:GO:0031410	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EnsemblPlantsGene:Os04g0570000	EnsemblPlants:Os04t0570000-00	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF102	UniProt:Q7XU38	SUPFAM:SSF48264
TMHMM:TMhelix	UniParc:UPI00000A8FEB	RefSeq:XP_015634604.1	SEG:seg	:	:

Description

CYP87A3Cytochrome P450 family protein. (Os04t0570000-00)

Coordinates

chr4:-:28672747..28677225

Molecular Weight (calculated)

57410.2 Da

IEP (calculated)

9.070

GRAVY (calculated)

0.025

Length

514 amino acids

Sequence
(BLAST)

001: MQPYLQLASL RLATTIPLAP RLYDANLLAA SGAAMASSMA YIALLCAALA AVVALLRWAY RWSHPRSNGR LPPGSLGLPV IGETLQFFAP NPTCDLSPFV
101: KERIKRYGSI FKTSVVGRPV VVSADPEMNY YVFQQEGKLF ESWYPDTFTE IFGRDNVGSL HGFMYKYLKT LVLRLYGQEN LKSVLLAETD AACRGSLASW
201: ASQPSVELKE GISTMIFDLT AKKLIGYDPS KPSQVNLRKN FGAFICGLIS FPLNIPGTAY HECMEGRKNA MKVLRGMMKE RMAEPERPCE DFFDHVIQEL
301: RREKPLLTET IALDLMFVLL FASFETTALA LTIGVKLLTE NPKVVDALRE EHEAIIRNRK DPNSGVTWAE YKSMTFTSQV IMEIVRLANI VPGIFRKALQ
401: DVEIKGYTIP AGWGIMVCPP AVHLNPEIYE DPLAFNPWRW QGKPEITGGT KHFMAFGGGL RFCVGTDLSK VLMATFIHSL VTKYSWRTVK GGNIVRTPGL
501: SFPDGFHIQL FPKN

Best Arabidopsis Sequence Match ( AT1G12740.1 )
(BLAST)

001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD

Arabidopsis Description

CYP87A2Cytochrome P450, family 87, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:Q9LN73]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.