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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES11705 Sorghum cytosol 86.22 84.17
Zm00001d026690_P001 Maize cytosol 82.16 83.75
TraesCS2D01G577000.1 Wheat cytosol 85.41 80.82
TraesCS2A01G566700.1 Wheat cytosol 85.14 80.56
TraesCS2B01G630000.1 Wheat cytosol 85.41 80.2
HORVU2Hr1G125950.1 Barley cytosol 79.73 78.88
Os04t0432000-02 Rice cytosol 74.05 76.32
GSMUA_Achr11P... Banana cytosol 73.24 75.91
GSMUA_Achr6P18870_001 Banana cytosol 72.7 75.14
GSMUA_Achr5P01140_001 Banana cytosol 70.54 75.0
Os01t0869900-01 Rice cytosol 72.7 74.72
Os02t0551100-01 Rice plasma membrane 71.89 72.88
AT2G23030.1 Thale cress cytosol 64.86 70.8
Bra032188.1-P Field mustard cytosol 65.14 70.67
CDX89537 Canola cytosol 64.05 70.54
CDY38921 Canola cytosol 64.59 70.09
Os07t0622000-01 Rice plasma membrane 64.05 69.91
Os03t0390200-01 Rice cytosol 63.78 69.01
Os10t0564500-01 Rice cytosol, plastid 61.89 68.56
Os03t0610900-01 Rice cytosol 62.16 63.54
Os12t0586100-01 Rice cytosol 61.35 62.88
Os03t0764800-01 Rice plasma membrane 60.54 60.38
Os05t0433100-00 Rice cytosol 34.86 52.44
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.5.2Gene3D:3.30.200.20EntrezGene:4337502EMBL:AB125306EMBL:AK100269
ProteinID:BAF16270.1ProteinID:BAS91779.1ProteinID:CAE05772.1ProteinID:EAZ32513.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468
GO:GO:0006950GO:GO:0006970GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009628GO:GO:0009719GO:GO:0009738GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719EMBL:JF733763EMBL:JN848807
InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os04g0691100EnsemblPlants:Os04t0691100-01PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24343PANTHER:PTHR24343:SF161InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
UniProt:Q7XKA8SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00001B1E07RefSeq:XP_015635635.1
SEG:seg:::::
Description
STRESS/ABA-ACTIVATED PROTEIN KINASE 5Serine/threonine protein kinase, Hyperosmotic stress response (Os04t0691100-01)
Coordinates
chr4:+:35344338..35346212
Molecular Weight (calculated)
42168.0 Da
IEP (calculated)
6.381
GRAVY (calculated)
-0.501
Length
370 amino acids
Sequence
(BLAST)
001: MEKYEPVREI GAGNFGVAKL MRNKETRELV AMKFIERGNR IDENVFREIV NHRSLRHPNI IRFKEVVVTG RHLAIVMEYA AGGELFERIC EAGRFHEDEA
101: RYFFQQLVCG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKL ADVWSCGVTL YVMLVGAYPF
201: EDPKDPKNFR KTISRIMSVQ YKIPEYVHVS QPCRHLLSRI FVANPYKRIS MGEIKSHPWF LKNLPRELKE EAQAVYYNRR GADHAASSAS SAAAAAAFSP
301: QSVEDIMRIV QEAQTVPKPD KPVSGYGWGT DDDDDDQQPA EEEDEEDDYD RTVREVHASV DLDMSNLQIS
Best Arabidopsis Sequence Match ( AT1G60940.2 )
(BLAST)
001: MDKYELVKDI GAGNFGVARL MRVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THIAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSMPKSTV GTPAYIAPEV LSRGEYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFK KTIQRIMAVK YKIPDYVHIS QDCKHLLSRI FVTNSNKRIT IGDIKKHPWF LKNLPRELTE IAQAAYFRKE NPTFSLQSVE EIMKIVEEAK
301: TPARVSRSIG AFGWGGGEDA EGKEEDAEEE VEEVEEEEDE EDEYDKTVKQ VHASMGEVRV S
Arabidopsis Description
SRK2BSerine/threonine-protein kinase SRK2B [Source:UniProtKB/Swiss-Prot;Acc:Q9C958]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.