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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
MultiLoc:extracellular
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
YLoc:extracellular
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0866400-01 Rice cytosol, extracellular, plasma membrane 61.79 22.42
KRH43947 Soybean cytosol 56.91 20.47
KRH10483 Soybean cytosol 39.84 20.42
Os03t0267300-01 Rice plastid 44.72 13.55
Os06t0664200-01 Rice plastid 34.15 10.47
Os04t0234600-01 Rice plastid 26.02 8.16
Protein Annotations
KEGG:00010+3.1.3.11KEGG:00030+3.1.3.11KEGG:00051+3.1.3.11KEGG:00680+3.1.3.11KEGG:00710+3.1.3.11Gene3D:3.30.540.10
MapMan:50.3.1UniProt:A0A0P0WMW5ProteinID:BAS94222.1InterPro:FBPase_NInterPro:FBPase_class-1InterPro:FBPtase
GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016311GO:GO:0016787GO:GO:0016791GO:GO:0042132EnsemblPlantsGene:Os05g0438600EnsemblPlants:Os05t0438600-01
PFAM:PF00316PRINTS:PR00115PANTHER:PTHR11556PANTHER:PTHR11556:SF19SUPFAM:SSF56655UniParc:UPI0003939D52
Description
Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase domain containing protein. (Os05t0438600-01)
Coordinates
chr5:-:21493974..21496836
Molecular Weight (calculated)
13523.6 Da
IEP (calculated)
4.232
GRAVY (calculated)
0.508
Length
123 amino acids
Sequence
(BLAST)
001: LSVNVVGCSV LQIFGIYMIK DKDNVTLDDV LQPGTDMLAA GYCMYGSSCT LVLSTGNGVN GFTLDPSLGE FILTHPNIKV CDSTMQFLFL IGLVMDQNKM
101: AIFGTCTVLF FLCRYQIEER SIQ
Best Arabidopsis Sequence Match ( AT1G43670.1 )
(BLAST)
001: MDHAADAHRT DLMTITRFVL NEQSKYPESR GDFTILLSHI VLGCKFVCSA VNKAGLAKLI GLAGETNIQG EEQKKLDVLS NDVFVNALVS SGRTSVLVSE
101: EDEEATFVEP SKRGKYCVVF DPLDGSSNID CGVSIGTIFG IYTLDHTDEP TTADVLKPGN EMVAAGYCMY GSSCMLVLST GTGVHGFTLD PSLGEFILTH
201: PDIKIPNKGN IYSVNEGNAQ NWDGPTTKYV EKCKFPKDGS PAKSLRYVGS MVADVHRTLL YGGIFLYPAD KKSPNGKLRV LYEVFPMSFL MEQAGGQAFT
301: GKKRALDLVP EKIHERSPIF LGSYDDVEEI KALYAEEEKK N
Arabidopsis Description
CYFBPFructose-1,6-bisphosphatase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9MA79]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.