Factsheet for Os05t0490700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

plasma membrane: 17407182
plasma membrane: 17827676
extracellular: 17951457
extracellular: 18986194
extracellular: 19036832
extracellular: 19118651
nucleus: 19321431
nucleus: 19621931
extracellular: 20433195
extracellular: 21420516
nucleus: 23303719
nucleus: 26035336

msms PMID: 20433195 doi

A Pandey, U Rajamani, J Verma, P Subba, N Chakraborty, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi-110067, India.

msms PMID: 17407182 doi

F Chen, Y Yuan, Q Li, Z He

National Key laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, The Chinese Academy of Sciences, Shanghai, China.

msms PMID: 17951457 doi

J Zhu, S Alvarez, EL Marsh, ME Lenoble, IJ Cho, M Sivaguru, S Chen, HT Nguyen, Y Wu, DP Schachtman, RE Sharp

Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.

msms PMID: 19036832 doi

L Zhang, LH Tian, JF Zhao, Y Song, CJ Zhang, Y Guo

Institute of Molecular and Cell Biology, Hebei Normal University, Shijiazhuang 050016, China.

msms PMID: 19118651 doi

L Tian, L Zhang, J Zhang, Y Song, Y Guo

Institute of Molecular Cell Biology, Hebei Normal University, Shijiazhuang 050016, PR China.

msms PMID: 19321431 doi

MK Choudhary, D Basu, A Datta, N Chakraborty, S Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 23303719 doi

Q He, L Chen, Y Xu, W Yu

State Key Laboratory for Agrobiotechnology, Institute of Plant Molecular Biology and Agricultural Biotechnology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong.

msms PMID: 17827676 doi

S Nohzadeh Malakshah, M Habibi Rezaei, M Heidari, GH Salekdeh

Agricultural Biotechnology Research Institute of Iran, Karaj, Iran.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 18986194 doi

YH Jung, SH Jeong, SH Kim, R Singh, JE Lee, YS Cho, GK Agrawal, R Rakwal, NS Jwa

Department of Molecular Biology, Sejong University, Gunja-dong, Seoul 143-747, South Korea.

msms PMID: 21420516 doi

Y Song, C Zhang, W Ge, Y Zhang, AL Burlingame, Y Guo

Institute of Molecular Cell Biology, Hebei Normal University, Shijiazhuang, Hebei Province, 050016, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0392400-01
Os07t0620200-01
Os09t0463700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Os03t0392400-01	AT5G09540.1	21798944
AT1G73100.1	Os07t0620200-01	AT5G09540.1	21798944
AT1G73100.1	Os09t0463700-01	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010646_P001	Maize	plastid	81.25	83.74
TraesCS1B01G378900.1	Wheat	nucleus	83.04	82.79
TraesCS1D01G366800.1	Wheat	nucleus	83.18	82.69
TraesCS1A01G362000.1	Wheat	nucleus	83.04	82.54
EES19725	Sorghum	nucleus	82.44	82.2
Zm00001d038541_P002	Maize	nucleus	82.74	80.35
HORVU1Hr1G068460.1	Barley	nucleus	80.51	80.27
TraesCS1B01G319000.1	Wheat	nucleus	79.91	79.67
TraesCS1A01G308300.1	Wheat	nucleus	79.46	79.23
TraesCS1D01G307700.1	Wheat	nucleus	79.17	78.93
HORVU0Hr1G001190.1	Barley	nucleus	80.65	75.91
Os01t0811300-01	Rice	nucleus, plasma membrane	72.92	66.58
Os12t0128450-00	Rice	nucleus	51.34	56.19
CDY04931	Canola	cytosol, extracellular, nucleus	6.25	55.26
Os11t0131600-00	Rice	nucleus	54.32	54.97
Bra009408.1-P	Field mustard	nucleus	37.35	49.02
KRH56252	Soybean	nucleus	14.73	46.48
Os11t0602200-01	Rice	nucleus	53.87	44.53
Bra028776.1-P	Field mustard	nucleus	41.96	44.41
Solyc09g082050.2.1	Tomato	nucleus	42.56	44.2
Bra005829.1-P	Field mustard	nucleus	41.82	43.57
CDY11319	Canola	nucleus	41.82	43.57
CDX80930	Canola	nucleus	41.52	43.32
KRH66648	Soybean	nucleus	45.54	43.22
KRH62706	Soybean	nucleus	42.71	43.03
VIT_13s0047g00120.t01	Wine grape	nucleus	45.83	43.02
KRH13229	Soybean	nucleus	43.01	42.94
PGSC0003DMT400077329	Potato	nucleus	42.86	42.92
KRH20576	Soybean	nucleus	42.86	42.79
AT5G04940.2	Thale cress	nucleus	42.11	42.24
CDX98805	Canola	nucleus	41.07	42.14
AT1G73100.1	Thale cress	nucleus	41.82	42.0
CDX68245	Canola	nucleus	41.22	41.59
CDY11129	Canola	nucleus	41.22	41.41
CDY61331	Canola	nucleus	41.07	41.26
Bra009409.1-P	Field mustard	nucleus	40.77	41.2
Os03t0320400-01	Rice	nucleus	32.59	41.01
CDX96449	Canola	nucleus	40.03	40.94
VIT_08s0040g00360.t01	Wine grape	nucleus	44.79	40.84
CDY59935	Canola	nucleus	40.03	40.82
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	18.9	40.71
Solyc10g077070.1.1	Tomato	nucleus	42.71	40.2
Bra016018.1-P	Field mustard	nucleus	40.33	40.03
PGSC0003DMT400018512	Potato	nucleus	42.56	39.83
CDX98804	Canola	nucleus	36.16	39.64
KRG95012	Soybean	plastid	28.12	38.73
CDY14135	Canola	nucleus	41.52	38.64
AT1G17770.1	Thale cress	nucleus	36.01	34.92
CDY26218	Canola	nucleus	33.93	32.66
CDY66122	Canola	nucleus	33.78	31.79
AT2G24740.1	Thale cress	nucleus	34.82	30.99
Os08t0565700-01	Rice	nucleus	27.38	30.98
Os07t0435900-01	Rice	nucleus	30.21	29.68
CDY56214	Canola	nucleus	34.82	29.51
Os01t0927000-01	Rice	nucleus	28.57	28.96
CDX70182	Canola	nucleus	40.77	27.08
Os01t0772150-00	Rice	nucleus	13.54	26.92
Bra025949.1-P	Field mustard	nucleus	34.08	25.64
CDY26221	Canola	nucleus	33.93	25.47
Bra004258.1-P	Field mustard	nucleus	34.82	25.46
Os09t0362900-01	Rice	mitochondrion, nucleus	31.1	22.69
Os04t0544100-01	Rice	nucleus	26.34	21.05
Os08t0400200-00	Rice	nucleus	31.25	17.9
Os02t0708600-01	Rice	nucleus	12.5	14.92
Os02t0621100-01	Rice	nucleus	16.37	14.84
CDY01852	Canola	plasma membrane	36.46	13.2
Os08t0399300-00	Rice	nucleus	13.69	10.55
Os08t0400000-01	Rice	mitochondrion	14.43	10.46
Os04t0692900-01	Rice	nucleus	4.46	6.8
Os02t0708500-01	Rice	cytosol	2.38	3.67
CDX86631	Canola	cytosol	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:4339168
ProteinID:AAT69639.1	EMBL:AK069035	ProteinID:BAF17817.1	ProteinID:BAS94658.1	ProteinID:EEE64189.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	EnsemblPlantsGene:Os05g0490700	EnsemblPlants:Os05t0490700-01
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF372	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	UniProt:Q6F322	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI00003BF579	RefSeq:XP_015639838.1
RefSeq:XP_015639839.1	SEG:seg	:	:	:	:

Description

SET protein 22, SUVH Histone Methyltransferase 8Similar to SET domain protein SDG111. (Os05t0490700-01);Hypothetical gene. (Os05t0490700-02)

Coordinates

chr5:-:24115647..24121667

Molecular Weight (calculated)

73568.3 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.349

Length

672 amino acids

Sequence
(BLAST)

001: MDRASNFIPG PYQELVDAKP IRSLAPMFPA PLGINVNQSS TPPLVCVTPV GQFPVGFGSG ILPTFGSTTA FTTTANGVSY TSYTNNGAID ATPISAYKTR
101: PGIVSLDGDE PYSGSASGRK SKRSSGSAAD GSNGVKFKRP KPVYKNFVAG KELAFLPPSS SDPREVVEAV HMTFEALRRR HLQLDEIQET SKRADLKAGA
201: IMMASNIRAN VGKRVGLVPG VEIGDIFYFR MELCIIGLHA PSMGGIDYMS AKFGSDEDSV AICIVAAGGY ENVDDDTDTL VYSGSGGNSR NSEERHDQKL
301: ERGNLALERS LHRKNEIRVV RGFRDPFCLT GKIYIYDGLY KIQESWKERT KSGINCFKYK LLREPGQPDG AALWKMTQGW IDNPASRGRV ILPDLSSAAE
401: ALPVCLVNEV DHEKGPGHFT YASQVKYLRP LSSMKPLQGC GCQSVCLPGD PNCACGQHNG GDLPYSSSGL LACRKPIIYE CGDACHCTTN CRNRVTQKGV
501: RFHFEVFRTA NRGWGLRCWD PIRAGAFICE YTGEVIDELK VNLDDSEDDY IFQTVCPGEK TLKFNFGPEL IGEESTYVSA DEFEPLPIKI SAKKMGNVSR
601: FMNHSCSPNV FWQPVQHDHG DDSHPHIMFF ALKHIPPMTE LTFDYGVAGS ESSGSRRTKN CFCGSSNCRG VF

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.