Factsheet for Os06t0173800-00

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plasma membrane 5
extracellular 6
endoplasmic reticulum 5
golgi 5
vacuole 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006791_P001	Maize	nucleus	17.43	37.25
KXG21281	Sorghum	nucleus	14.98	28.32
TraesCS7B01G019400.1	Wheat	nucleus	19.57	26.78
TraesCS1B01G283000.1	Wheat	nucleus	14.37	26.11
Zm00001d050594_P001	Maize	nucleus	16.82	26.07
TraesCS7A01G120900.1	Wheat	nucleus	19.88	25.19
TraesCS7B01G093600.1	Wheat	nucleus	13.76	25.0
TraesCS7B01G019200.1	Wheat	nucleus	20.49	24.45
TraesCS7D01G118600.1	Wheat	nucleus	20.49	24.45
TraesCS7A01G121100.1	Wheat	nucleus	19.88	23.72
EER89387	Sorghum	nucleus	22.63	23.27
TraesCS7D01G189800.2	Wheat	nucleus	14.07	23.23
EES18995	Sorghum	nucleus	19.57	23.19
HORVU7Hr1G024150.1	Barley	nucleus	16.82	23.11
TraesCS7D01G108000.1	Wheat	nucleus	19.27	22.99
HORVU7Hr1G025580.1	Barley	cytosol, nucleus, plastid	20.8	22.82
Zm00001d024809_P001	Maize	nucleus	19.88	22.73
TraesCS7A01G188800.1	Wheat	nucleus	12.54	22.65
TraesCS7A01G135300.1	Wheat	nucleus	20.18	22.6
EES18996	Sorghum	nucleus	19.88	22.57
HORVU7Hr1G028140.1	Barley	nucleus	14.68	22.22
Zm00001d024814_P001	Maize	nucleus	18.96	22.06
TraesCS1B01G374300.1	Wheat	nucleus	23.24	21.71
TraesCS7D01G108100.1	Wheat	nucleus	18.04	21.61
EER89299	Sorghum	nucleus	20.18	21.57
HORVU7Hr1G038390.1	Barley	mitochondrion, nucleus, plastid	13.46	21.46
TraesCS1A01G357600.1	Wheat	nucleus	22.63	21.14
KXG21280	Sorghum	nucleus	22.94	21.07
Zm00001d045162_P001	Maize	nucleus	18.65	21.03
OQU76057	Sorghum	nucleus	19.57	20.85
HORVU1Hr1G080380.1	Barley	nucleus	21.1	20.47
TraesCS1D01G362000.1	Wheat	nucleus	18.96	20.39
EER89573	Sorghum	nucleus	18.96	19.62
EER88198	Sorghum	nucleus	18.96	19.5
EER88196	Sorghum	nucleus	18.65	19.3
OQU77390	Sorghum	nucleus	14.37	19.26
EES18997	Sorghum	nucleus	21.41	18.62
TraesCS7D01G135600.1	Wheat	nucleus	20.18	18.54
EER94504	Sorghum	nucleus	16.21	18.4
Zm00001d010889_P001	Maize	plastid	13.46	18.26
Zm00001d024810_P001	Maize	nucleus	21.71	18.21
TraesCS7A01G135000.1	Wheat	nucleus	23.85	18.18
TraesCS7B01G036500.1	Wheat	nucleus	23.85	18.14
KXG21283	Sorghum	nucleus	13.46	18.03
TraesCS7D01G135000.1	Wheat	nucleus	22.94	17.44
TraesCS7D01G135700.1	Wheat	nucleus	22.94	17.24
TraesCS7A01G135400.1	Wheat	nucleus	22.63	17.21
TraesCS7B01G036700.1	Wheat	nucleus	22.32	17.06
TraesCS7D01G135200.1	Wheat	nucleus	22.32	17.02
TraesCS7D01G135500.1	Wheat	nucleus	20.49	16.71
TraesCS7D01G135300.1	Wheat	nucleus	21.71	16.51
OQU77389	Sorghum	nucleus	16.82	16.47
TraesCS7A01G135200.1	Wheat	nucleus	21.1	16.08
TraesCS7A01G135100.1	Wheat	nucleus	20.49	15.62
KXG21278	Sorghum	nucleus	15.9	15.12
PGSC0003DMT400086891	Potato	nucleus	9.17	13.89
Solyc02g082380.1.1	Tomato	nucleus	9.17	13.51
TraesCS2D01G567700.1	Wheat	nucleus	14.07	12.17
TraesCS2B01G617700.1	Wheat	nucleus	14.68	12.03
Solyc02g082390.1.1	Tomato	nucleus	9.48	11.03
PGSC0003DMT400091980	Potato	nucleus	10.4	8.44

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:107275902	MapMan:15.5.2.2	ProteinID:BAD72293.1	ProteinID:BAS96399.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:IPR017884	EnsemblPlantsGene:Os06g0173800	EnsemblPlants:Os06t0173800-00	PFscan:PS51293
PANTHER:PTHR44042	PANTHER:PTHR44042:SF3	UniProt:Q5SNB3	InterPro:SANT/Myb	InterPro:SANT_dom	SMART:SM00717
SUPFAM:SSF46689	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000046D47B	RefSeq:XP_015642111.1	SEG:seg

Description

SANT domain, DNA binding domain containing protein. (Os06t0173800-00)

Coordinates

chr6:-:3723342..3725225

Molecular Weight (calculated)

34912.7 Da

IEP (calculated)

4.325

GRAVY (calculated)

-0.256

Length

327 amino acids

Sequence
(BLAST)

001: MLLSHCFAVV FALSALLAGL ALAIDEGFGM EWTAAELAEA RSVIARVSDA YNSGVGSSSS ACDTKHDRIM RELQARFPSR TMVQVIDLYV NLTVETAAQP
101: QDAGSAGDAA AVVHPTFAGG MPVVNNNDGM VHGGAAMEVG AVAVNGGDGE VVNPDNADDD VLWTDYEHRL FLTGMRVYGR GDWRNISRYF VRSKTPEQIS
201: MYADNYFHMM EIAAAMEADG GDDDDGHHEI NNNNNNLGGG QLHAVVGAVG HGPGAGHIAP ATPSNNNTAA AAVNNNVDTP FWVPLLYNPE IEQRMMEMQA
301: QSQKAWDDQQ MKMAEAATPK EEGAADK

Best Arabidopsis Sequence Match ( AT1G49010.1 )
(BLAST)

001: MESVVATWSR EEEKAFENAI ALHCVEEEIT EDQWNKMSSM VPSKALEEVK KHYQILLEDV KAIENGQVPL PRYHHRKGLI VDEAAAAATS PANRDSHSSG
101: SSEKKPNPGT SGISSSNGGR SGGSRAEQER RKGIPWTEEE HRLFLLGLDK FGKGDWRSIS RNFVISRTPT QVASHAQKYF IRLNSMNRDR RRSSIHDITT
201: VNNQAPAVTG GGQQPQVVKH RPAQPQPQPQ PQPQQHHPPT MAGLGMYGGA PVGQPIIAPP DHMGSAVGTP VMLPPPMGTH HHHHHHHLGV APYAVPAYPV
301: PPLPQQHPAP STMH

Arabidopsis Description

At1g49010 [Source:UniProtKB/TrEMBL;Acc:Q9M9A3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.