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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
PProwler:secretory
TargetP:plastid
YLoc:extracellular
 nucleus: 19621931
extracellular: 23159799
extracellular: 24083427
plasma membrane: 27800704
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0490400-00 Rice extracellular 62.27 74.38
TraesCS7B01G099800.1 Wheat extracellular 50.9 69.12
TraesCS7A01G193800.1 Wheat cytosol 52.45 68.35
TraesCS7B01G099300.1 Wheat mitochondrion 51.68 66.01
OQU75581 Sorghum extracellular 55.81 65.65
EER88301 Sorghum extracellular 55.56 64.95
HORVU7Hr1G045600.1 Barley extracellular 54.26 64.81
TraesCS1A01G356100.1 Wheat extracellular 54.01 64.51
TraesCS7D01G195100.1 Wheat extracellular 54.01 64.51
TraesCS7D01G223900.1 Wheat extracellular 54.01 64.51
TraesCS7B01G128700.1 Wheat extracellular 53.75 64.2
Zm00001d045845_P001 Maize extracellular 55.04 63.96
TraesCS7A01G222200.1 Wheat extracellular 53.49 63.89
TraesCS1D01G354100.1 Wheat extracellular 53.49 63.89
EER88299 Sorghum extracellular, golgi 55.81 63.72
EER89667 Sorghum extracellular 54.52 63.55
HORVU7Hr1G039590.1 Barley extracellular 54.01 63.53
TraesCS7B01G099600.1 Wheat extracellular 54.01 63.33
TraesCS7D01G195000.1 Wheat extracellular 53.75 63.22
HORVU7Hr1G039560.1 Barley extracellular 53.75 63.22
TraesCS7B01G099200.1 Wheat extracellular 53.75 63.22
TraesCS1B01G365300.1 Wheat extracellular 53.23 63.19
TraesCSU01G163200.1 Wheat extracellular 53.49 62.92
TraesCS7D01G195400.1 Wheat extracellular 53.49 62.92
TraesCS7B01G099400.1 Wheat extracellular 53.49 62.92
TraesCSU01G096700.1 Wheat extracellular 53.49 62.92
TraesCSU01G151100.1 Wheat extracellular 53.49 62.92
TraesCS7A01G194200.1 Wheat extracellular 52.97 62.88
HORVU7Hr1G039570.1 Barley extracellular 53.49 62.54
TraesCS7D01G195700.1 Wheat extracellular 53.49 62.54
Zm00001d037410_P001 Maize extracellular 54.52 62.43
TraesCS7D01G195500.1 Wheat extracellular 53.23 62.42
TraesCS7D01G195200.1 Wheat extracellular 53.23 62.42
HORVU7Hr1G039550.2 Barley extracellular 52.97 62.31
TraesCS7A01G194000.1 Wheat extracellular 52.97 62.12
TraesCS7A01G194100.1 Wheat extracellular 52.45 61.7
HORVU5Hr1G012910.1 Barley extracellular 40.31 61.66
HORVU7Hr1G039580.1 Barley extracellular 54.01 61.65
TraesCS7A01G222300.1 Wheat extracellular 39.53 60.24
HORVU1Hr1G081270.1 Barley endoplasmic reticulum, golgi, mitochondrion 54.26 59.49
TraesCS7A01G193900.1 Wheat extracellular 44.19 59.17
TraesCS7B01G099100.1 Wheat mitochondrion 53.23 58.19
TraesCSU01G096600.1 Wheat extracellular 47.55 55.09
Os11t0661600-01 Rice extracellular 47.29 54.63
Os05t0499300-01 Rice mitochondrion 42.12 50.0
GSMUA_Achr6P21980_001 Banana extracellular 35.66 48.42
Bra039137.1-P Field mustard extracellular 39.79 48.28
CDY37537 Canola extracellular 39.79 48.28
CDY55811 Canola extracellular, golgi, vacuole 39.53 47.96
Bra021488.1-P Field mustard extracellular, golgi 39.28 47.65
CDY43275 Canola extracellular 38.76 47.02
AT3G01190.1 Thale cress extracellular, golgi, vacuole 38.24 46.11
VIT_10s0116g00340.t01 Wine grape extracellular 38.24 45.4
Os07t0531400-01 Rice extracellular 39.53 45.13
Zm00001d045846_P001 Maize extracellular 25.06 44.7
CDX85056 Canola extracellular 37.98 44.68
PGSC0003DMT400056119 Potato extracellular 37.73 44.51
CDX85561 Canola extracellular 37.47 43.94
Bra023509.1-P Field mustard extracellular 37.47 43.94
Solyc12g005370.1.1 Tomato extracellular 37.21 43.9
AT5G15180.1 Thale cress extracellular 36.95 43.47
CDX91005 Canola extracellular 36.95 43.33
GSMUA_Achr9P11910_001 Banana extracellular 24.29 43.32
Os02t0161800-01 Rice extracellular, mitochondrion 38.24 42.53
Os06t0681600-01 Rice extracellular 36.95 42.43
GSMUA_Achr9P11940_001 Banana extracellular 23.77 42.4
Os01t0172600-01 Rice extracellular 23.77 40.53
Os03t0563600-01 Rice extracellular 36.43 40.52
Os12t0530100-01 Rice extracellular, golgi 35.66 39.77
Os01t0787000-01 Rice extracellular 33.59 38.69
Os05t0499400-01 Rice extracellular 34.37 38.11
Os11t0210100-01 Rice extracellular 31.27 36.23
Os01t0270300-01 Rice extracellular 29.72 35.49
CDX69544 Canola extracellular 37.47 35.11
Os07t0104500-01 Rice extracellular 32.3 34.63
Os12t0191500-01 Rice extracellular 28.94 34.25
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1ProteinID:BAF19383.2ProteinID:BAS97411.1
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0005618GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009505GO:GO:0009506GO:GO:0009664GO:GO:0009987GO:GO:0016043
GO:GO:0016491GO:GO:0020037GO:GO:0030312GO:GO:0042744GO:GO:0046872GO:GO:0055114
GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016EnsemblPlantsGene:Os06g0306300EnsemblPlants:Os06t0306300-01
PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435PFscan:PS50873PANTHER:PTHR31235
PANTHER:PTHR31235:SF54InterPro:Peroxidase_plnInterPro:Peroxidases_heam-ligand_BSUniProt:Q0DCP0SUPFAM:SSF48113InterPro:Secretory_peroxidase
SignalP:SignalP-noTMUniParc:UPI0001B67017SEG:seg:::
Description
class III peroxidase 78Haem peroxidase domain containing protein. (Os06t0306300-01)
Coordinates
chr6:+:11559570..11560896
Molecular Weight (calculated)
41640.3 Da
IEP (calculated)
9.006
GRAVY (calculated)
-0.203
Length
387 amino acids
Sequence
(BLAST)
001: QQHQQIEQQN ILCLIWLLIC VSWPWRSPGV VSRCCCSWCL SPRALRPRRL TSSASTTTAR RARTSRPSSA TRWRRSSAPP PASPARSSAS ISTTASSGYV
101: LRSPASCRVA CTAAPLIDRS IDVVFFCNLQ GCDASVLLSS TAGNVAERDA KPNKSLRGFG SVERVKARLE AACPGTVSCA DVLTLMARDA VVLARGPTWP
201: VALGRRDGRV SAAGEAAASL PPADGDIATL LRIFAANDLD IKDLAVLSGA HTLGTAHCPS YAGRLYNFTG KNDADPSLDG EYAGRLRARC ASATDESGMI
301: SEMDPGSYKT FDTSYYRHVA KRRGLFSSDA SLLTDATTRD YVRRIATGKF DAEFFSDFGE SMTKMGNVQV LTGEEGEIRK KCYVINS
Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)
001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS
Arabidopsis Description
PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.