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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • nucleus 1
  • plastid 2
  • peroxisome 1
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0105600-00 Rice endoplasmic reticulum, plasma membrane 49.49 66.32
Os01t0544200-01 Rice endoplasmic reticulum, golgi 46.67 50.56
Os08t0105400-00 Rice peroxisome, plasma membrane, plastid 68.21 49.81
TraesCS2B01G058100.1 Wheat endoplasmic reticulum, golgi 60.0 49.47
Os06t0325900-00 Rice endoplasmic reticulum 63.08 45.22
TraesCS2A01G045600.1 Wheat endoplasmic reticulum, golgi 56.92 45.03
EES13191 Sorghum endoplasmic reticulum, plastid, vacuole 60.26 43.84
EES13192 Sorghum plastid 59.23 43.75
Zm00001d035013_P001 Maize endoplasmic reticulum, plasma membrane, plastid 60.77 43.41
TraesCS2A01G045900.1 Wheat endoplasmic reticulum, golgi, plastid 58.97 43.15
HORVU2Hr1G006910.14 Barley endoplasmic reticulum, golgi 59.49 43.12
TraesCS2B01G058000.1 Wheat endoplasmic reticulum, golgi 58.97 42.91
TraesCS2D01G044300.1 Wheat endoplasmic reticulum, golgi 58.97 42.83
TraesCS2D01G044700.1 Wheat endoplasmic reticulum, golgi 58.72 42.64
TraesCS2A01G046000.1 Wheat endoplasmic reticulum, golgi, plastid 57.95 42.24
EES02571 Sorghum peroxisome, plasma membrane, plastid 57.95 41.62
TraesCS2A01G045700.1 Wheat endoplasmic reticulum, golgi 57.18 41.53
TraesCS2B01G057800.1 Wheat endoplasmic reticulum, golgi 56.41 41.51
HORVU2Hr1G006850.2 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 56.67 41.39
TraesCS2B01G057900.1 Wheat plastid 56.67 41.15
TraesCSU01G155100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 51.79 40.4
EES13194 Sorghum plastid 55.13 39.96
HORVU1Hr1G007840.2 Barley endoplasmic reticulum, extracellular 52.31 39.84
Os01t0543600-01 Rice cytosol 17.95 38.25
HORVU1Hr1G007790.1 Barley endoplasmic reticulum 49.23 37.14
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 36.41 35.24
Os08t0105800-01 Rice endoplasmic reticulum, golgi 47.44 33.7
Os11t0465200-01 Rice endoplasmic reticulum 43.08 32.75
HORVU2Hr1G006830.7 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 29.49 31.68
Os08t0106300-00 Rice cytosol 21.28 27.95
GSMUA_Achr11P... Banana mitochondrion 36.67 27.66
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 25.64 27.47
Os05t0424300-01 Rice endoplasmic reticulum 36.15 27.17
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 27.69 26.47
Os05t0515200-01 Rice plasma membrane 35.38 26.44
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 30.26 25.43
Os01t0227700-01 Rice endoplasmic reticulum, golgi 34.87 25.23
TraesCS2D01G044600.1 Wheat cytosol 17.69 24.64
Os05t0361000-00 Rice endoplasmic reticulum 33.33 23.77
Os01t0227800-01 Rice plasma membrane 32.82 23.7
Os09t0530300-01 Rice extracellular, plasma membrane 30.26 23.27
Os01t0227500-01 Rice endoplasmic reticulum 32.56 22.64
Os06t0267400-00 Rice endoplasmic reticulum 23.59 21.9
Os09t0530275-00 Rice endoplasmic reticulum, extracellular 21.28 19.08
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EMBL:AK058639ProteinID:BAD08937.1ProteinID:BAD09376.1ProteinID:BAT03446.1
InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396EnsemblPlantsGene:Os08g0105700EnsemblPlants:Os08t0105700-01
PFAM:PF00067PRINTS:PR00463PANTHER:PTHR24298PANTHER:PTHR24298:SF219UniProt:Q6ZD84SUPFAM:SSF48264
TMHMM:TMhelixUniParc:UPI000023AC77SEG:seg:::
Description
Similar to Bx2-like protein. (Os08t0105700-01)
Coordinates
chr8:-:296973..298367
Molecular Weight (calculated)
44258.9 Da
IEP (calculated)
7.475
GRAVY (calculated)
-0.043
Length
390 amino acids
Sequence
(BLAST)
001: MAVMLVPIPL LLLHQHHNHE HEHPSPVAPQ PTMASYYTLL LALLCPLLLL LIKLCRAKTR DDELFDKLPS PPGRLPVIGH LHLIGSLPYV SFRELAIKHG
101: PDLMLLRLGT VPTLVVSSAR AAQAILRTND HVFASRTYSA VTDILFYGSS DVAFSPYGEY WRQVKKIATT HLLTNKKVRS YSRARQQEVR LVMARINEAA
201: VARTTVDLSE LLNWFTNDIV CHAVSGKFFR EEGQNQMFWE LIQANSLLLG GFNLEDYFPN LARVTTVRRL LCAKAHNVNK RWDQLLDKLI DDHATKRSSS
301: VLDLDNEESD FIDVLLSIQH EYGLTRDNVK AILVIMFEGG TDTAYIELEY AMAELIRKPQ LMAKLQAEVR SVVPRGQEIV TEEQLGRMPY
Best Arabidopsis Sequence Match ( AT3G48270.1 )
(BLAST)
001: MMIMFFLLCS IIFVVTIIIF RKQKRGKKRN TLPSPPGLPL IGNLHQLGRH PHRSLCSLSH RYGPLMLLHF GRVPVLVVSS AELARDVLKT HDRVFASRPR
101: SKIFEKLLYD KHDVASAPYG EYWRQMKSVC VLHLFSNKMV RSFREVREEE ISLMMEKIRK SISLPVNLSK ILVSLTNDVI CKVALGRKYG GETDFKELME
201: RLNKLLGTFS VGSYVPWLAW IDWIRGLDCQ LEKTANDVDK FFERVVQDHV DGNRDMTDFV DVLLAIQRDK TVGFEINRVS IKAIVMNVFV GGTDTSSTLM
301: EWAMTELLRH PKCLKRLQEE VRTICKDKSS VSEEEIQNMS YLKAVIKEAL RLHPPLPLMV PHESTQDVRL GDHHIPAGTQ VLINAWAIGR EAATWGPDVE
401: EFRPERHLDS SVDYRGQAFE LIPFGSGRRI CPAISFAVVL NEVVLANLVH RFDWRLSVES TEDQTEVAES TGIAIHRMFP LYAIASNTT
Arabidopsis Description
CYP71A26Cytochrome P450 71A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.