Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 3
- mitochondrion 1
- peroxisome 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0346400-01 | Rice | golgi, plasma membrane | 21.74 | 0.8 |
| Os08t0390000-02 | Rice | nucleus | 17.39 | 0.64 |
Protein Annotations
| EnsemblPlants:Os08t0513600-01 | EnsemblPlantsGene:Os08g0513600 | ProteinID:BAT06221.1 | UniParc:UPI000393B3AE | UniProt:A0A0P0XHL6 | MapMan:35.2 |
Description
Hypothetical conserved gene. (Os08t0513600-01)
Coordinates
chr8:+:25467761..25468115
Molecular Weight (calculated)
2394.9 Da
IEP (calculated)
10.455
GRAVY (calculated)
0.943
Length
23 amino acids
Sequence
(BLAST)
(BLAST)
1: VISVLALVVA SKYVPSNFRA SSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.