Factsheet for Os08t0542600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0359800-00	Rice	cytosol	2.92	0.7
Os05t0380300-01	Rice	plasma membrane	1.3	0.32
Os10t0130600-00	Rice	cytosol	1.3	0.31
Os03t0848700-01	Rice	plasma membrane	0.97	0.23
Os10t0131100-00	Rice	cytosol	0.65	0.16
Os08t0543100-00	Rice	cytosol	0.32	0.08
Os01t0358700-01	Rice	cytosol	0.0	0.0
Os01t0359400-03	Rice	cytosol	0.0	0.0
Os01t0359600-00	Rice	plasma membrane	0.0	0.0
Os03t0599000-01	Rice	cytosol, extracellular, plasma membrane	0.0	0.0
Os03t0849500-00	Rice	cytosol	0.0	0.0
Os08t0542200-01	Rice	cytosol	0.0	0.0
Os08t0543050-00	Rice	cytosol, plastid	0.0	0.0
Os08t0543500-01	Rice	cytosol, plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.1000	MapMan:35.2	EntrezGene:4346198	EMBL:AK058496	EMBL:AK121886	ProteinID:BAD08978.1
ProteinID:BAF24307.1	ProteinID:BAT06505.1	ProteinID:EAZ43521.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	InterPro:HAD-SF_hydro_IIA
InterPro:HAD-SF_hydro_IIA_hyp3	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EnsemblPlantsGene:Os08g0542600	EnsemblPlants:Os08t0542600-01
PFAM:PF13242	PFAM:PF13344	PANTHER:PTHR19288	PANTHER:PTHR19288:SF46	UniProt:Q6ZJG4	SUPFAM:SSF56784
TIGRFAMs:TIGR01459	TIGRFAMs:TIGR01460	UniParc:UPI000023AC98	RefSeq:XP_015648561.1	SEG:seg	:

Description

HAD-superfamily subfamily IIA hydrolase, hypothetical 3 protein. (Os08t0542600-01)

Coordinates

chr8:+:27142260..27144964

Molecular Weight (calculated)

33266.1 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.027

Length

308 amino acids

Sequence
(BLAST)

001: MASAASAPAF ERLAGIRALA ESGRFKAWFL DQFGVLHDGK KPYPGAVLAL EKLAEKGAKM VIISNSSRRS SVTMEKLESL GFDPSCFLRA ITSGELTHQY
101: LQKRDDPWFA ALGRKCVHLT WGNRGAISLE GLGLQVVSNV EEAEFILAHG TEALGLPSGD PLPKSLEELE QVLMLCLEKR LPMVVANPDY VTVEARDLRV
201: MPGTLAAKYE SLGGEVKWMG KPDKVIYTSA MSLAGVNPHE CITVGDSLHH DIKGANASRV ASAFITGGIH ATELGLNEIG EIAGEDAIDS LCRKHGSYPT
301: YVLPSFTW

Best Arabidopsis Sequence Match ( AT5G10460.1 )
(BLAST)

001: MFCSSQLSQP MNGLKDIVET RNFKAWLLDQ YGVLHDGKKP YPGAISTLKN LATAGAKIVI ISNSSRRAST TMEKLKGLGF DPSFFTGAIT SGELTHQSLQ
101: RRDDPWFAAL GRRCIHITWN DRGAISLEGL DLNVVENVEE ADFVLAHGTE ALGLPSGSVS PRTIDELEKI LEKSAARGLP MIVANPDYVT VEANVFHIMP
201: GTLASKYEEL GGEVKSMGKP HKMIYESAIA IAGVNPSESI AVGDSLHHDI RGANVSGIES IFITGGIHGN ELGLTSFDET ASLDSVKTLT AKHNAFPTYV
301: LSAFKW

Arabidopsis Description

At5g10460 [Source:UniProtKB/TrEMBL;Acc:Q6DBI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.