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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, nucleus
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 19502382
plastid: 27992503
plasma membrane: 28056797
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400003494 Potato cytosol 59.38 13.82
KRH45127 Soybean cytosol 57.81 1.28
Zm00001d019881_P001 Maize nucleus 76.56 0.99
TraesCS5D01G171900.1 Wheat nucleus 76.56 0.99
HORVU5Hr1G051500.2 Barley nucleus 76.56 0.98
TraesCS5B01G164500.2 Wheat nucleus, unclear 76.56 0.97
KXG24895 Sorghum nucleus 75.0 0.95
TraesCS5A01G167500.2 Wheat nucleus 75.0 0.95
Solyc02g089260.2.1 Tomato plastid 59.38 0.74
KRH01413 Soybean endoplasmic reticulum 57.81 0.72
AT3G02260.1 Thale cress nucleus 54.69 0.69
KRH45126 Soybean nucleus 0.0 0.0
PGSC0003DMT400003490 Potato nucleus 0.0 0.0
GSMUA_Achr1P19140_001 Banana cytosol 0.0 0.0
CDY64902 Canola extracellular 0.0 0.0
VIT_16s0039g01340.t01 Wine grape cytosol 0.0 0.0
Bra039167.1-P Field mustard cytosol, nucleus, plasma membrane 0.0 0.0
Protein Annotations
MapMan:35.1UniProt:A0A0P0XJE2ProteinID:BAT07020.1GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0006810GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008270
GO:GO:0009653GO:GO:0009719GO:GO:0009734GO:GO:0009826GO:GO:0009926GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0040007GO:GO:0046872
EnsemblPlantsGene:Os09g0247700EnsemblPlants:Os09t0247700-01UniParc:UPI000393ACB1:::
Description
Similar to Zinc finger, ZZ-type; Zinc finger, C2H2-type. (Os09t0247700-01)
Coordinates
chr9:-:3586694..3587046
Molecular Weight (calculated)
7051.4 Da
IEP (calculated)
4.329
GRAVY (calculated)
-0.220
Length
64 amino acids
Sequence
(BLAST)
1: KEKLGNMKEM LGFSKDVLSW LEDMTSSEDL QEAFDVMGAL PDVFSGGHTT CEDFVRAIIH GAKS
Best Arabidopsis Sequence Match ( AT3G02260.4 )
(BLAST)
0001: MADDLANLCR FLFDDTAFPS LSSSASSDLF SRRLRSDDSI KRGLRSFYLL LRWGVAPIGG DDADSSGKLR FETWSDSQLQ ALVSISQAIL LLSRSLLGTD
0101: LTLNQGLVDQ LEPIVLGVIQ EVMEFSLSFL EKSSFRQNDL KMEINMEILL EIASFDGSEK QYDILPDFSP AEVAELWPAF SGEHDNMDAQ SLVKCTFQGG
0201: RCSNEEKPVD RLLITLMSEC IESDVQAQSV VKSPFQQDCG DLNPFTRHLA VVHLRCVCRL IMVCKELVQL PNMLDEKTVD QAVLDKLSFC LRILKLLGSL
0301: SKDVQSIEND GSLLQAVASF TDAFPKLFRV FFEFTNHTAT EGNIESLSLA LVEGFLNLVQ LIFGKSSVFQ NVQACVAASI VSNLDSSVWR YDGSSCNLTP
0401: PLAYFPRSVI YTLKLIQDLK RQPYHIHDLR VLESEVTYED VSSTVDSVYF HLRQEKIPLL KCFTVEDIMR VIFPSSSQWM DNFFHLVYFL HREGVKLRPK
0501: VERTYSSLRS NSFAEVESQI SHDDEALFGN LFSEGSRSLC SIEPNDQPPV SVSSNLLLQA AKELLNFLRA CILCQEWVPS IYEDGCKKLD TGHIDILLNI
0601: VGCSIEDKAS DGGCMLQDEG RPGHVAFELL LNLLRSRALS DFLESYLFQQ ILVVENSDFN YNDKTLALLA HTLLCRPGLA GAQLRAKIYD GFVSFVTERA
0701: RGICAEALSL KELTACLPSA FHIEILLMAF HLSNEAEKAK FSNLIASCLH KVDTPAGICD GPQLSSWAML ISRLLVLLHH MLLHPNTCPT SLMLDLRSKL
0801: REVRSCGSNL HVTVGDHLSS WASLVARGIT DSWAEDESVS HLMSQMIDFS PHPPTFQNDV STAKTLNLDY GDLSASLCRV LGLWKGKKAG KVEDLLVERY
0901: IFMLSSDIAR INCALDSQPS LHVNYQNVDI SNSVDLISTS HLLVGDINVV GRNIELRNIL IGVLNQLQAA PEQVVEDLGW DYIREGAWLS LLLYFLDGGV
1001: WDYCNKNSCS EIDPFWKECT SVDAKYVAAA EGVVSYLMKT GDIAELLRML SSLVGKYLRV YKKAFLATFS DWNHHGHSSP SLLLLKHTQF GKSLQGEYAK
1101: IGDNSLHLQC IFYLSKLDSL GDGRGSGVLW KVFWEFMVHG FPTSLQTSSA ILLSCILSIR CIVLTINGLL KLGNSKEKFG VDTSVLHQLL DSIMIIKFDQ
1201: VFESFHGKCE EIHQNICAVL QLPDLTELFL MKDMEGFVRD ISAEQIDRSQ VLEGVITKIV DVMDSLSKDS SKSDIFKFYL GVDAVSEHTR EFYELQRGDL
1301: SVFIDSLDYC SLEPVNIKVL NFLVDLLSVA QSPDLRRRVQ QKFIDMDLIS LSGWLERRLL GSFVEEIDGK KTAKGNSLPF REAAMNFINC LVSSTNDLQT
1401: RELQNHLFEA LLISLDTAFL SFDIHMSMSY FHFVLQLARE DNLMKMVLKR TIMLMEKLAA EEKLLPGLKF IFGVIGTLLS NRSPSHGESL CGKSLASYKN
1501: TATGPLVPKL SGTTKKSDTL ALPVDQEGSS ISLECDVTSV DEDEDDGTSD GEVASLDKED EEDANSERYL ASKVCTFTSS GSNFMEQHWY FCYTCDLTVS
1601: KGCCSVCAKV CHRGHRVVYS RSSRFFCDCG AGGVRGSSCQ CLKPRKYNGN GSAPARGTNN FQSFLPLSED ADQLGESDSD VEEDGFGEEN HVVLYIPKET
1701: QYKMSLLLEE LGIEDRVLEL FSSLLPSITS KRDSGLSKEK QVNLGKDKVL SFDTDLLQLK KAYKSGSLDL KIKADYTNSK DLKSLLANGS LVKSLLSVSV
1801: RGRLAVGEGD KVAIFDVGQL IGQATIAPIN ADKANVKPLS RNIVRFEIVH LSFNPVVENY LAVAGLEDCQ ILTLNHRGEV IDRLAVELAL QGAFIRRIDW
1901: VPGSQVQLMV VTNKFVKIYD LSQDSISPTQ YFTLPNDMIV DATLFVASRG RVFLLVLSEQ GNLYRFELSW GGNAGATPLK EIVQIMGKDV TGKGSSVYFS
2001: PTYRLLFISY HDGSSFMGRL SSDATSLTDT SGMFEEESDC KQRVAGLHRW KELLAGSGLF ICFSSVKSNA VLAVSLRGDG VCAQNLRHPT GSSSPMVGIT
2101: AYKPLSKDNV HCLVLHDDGS LQIYSHVRSG VDTDSNFTAE KVKKLGSKIL NNKTYAGAKP EFPLDFFERA FCITADVRLG SDAIRNGDSE GAKQSLASED
2201: GFIESPSPVG FKISVSNPNP DIVMVGIRMH VGTTSASSIP SEVTIFQRSI KMDEGMRCWY DIPFTVAESL LADEDVVISV GPTTSGTALP RIDSLEVYGR
2301: AKDEFGWKEK MDAVLDMEAR VLGHGLLLPG SSKKRALAQS ASMEEQVIAD GLKLLSIYYS VCRPRQEVVL SELKCKQLLE TIFESDRETL LQTTACRVLQ
2401: SVFPRKEIYY QVKDTMRLLG VVKVTSILSS RLGILGTGGS IVEEFNAQMR AVSKVALTRK SNFSVFLEMN GSEVVDNLMQ VLWGILESEP LDTPTMNNVV
2501: MSSVELIYSY AECLASQGKD TGVHSVAPAV QLLKALMLFP NESVQTSSSL AISSRLLQVP FPKQTMLTTD DLVDNVTTPS VPIRTAGGNT HVMIEEDSIT
2601: SSVQYCCDGC STVPILRRRW HCTVCPDFDL CEACYEVLDA DRLPPPHTRD HPMTAIPIEV ESLGADTNEI QFSADEVGIS NMLPVVTSSI PQASTPSIHV
2701: LEPGESAEFS ASLTDPISIS ASKRAVNSLI LSEFLQELSG WMETVSGVQA IPVMQLFYRL SSAIGGAFMD SSKPEEISLD KLIKWLLGEI NLSKPFAAST
2801: RSSLGEIVIL VFMFFTLMLR SWHQPGSDGS SSKLGGSTDV HDRRIVQSST VVATQSSLHV QERDDFASQL VRACSCLRNQ EFVNYLMNIL QQLVHVFKSR
2901: AANVEARGSS SGSGCGAMLT VRRDLPAGNY SPFFSDSYAK AHRADIFVDY HRLLLENVFR LVYTLVRPEK QEKMGEKEKV YRNASSKDLK LDGFQDVLCS
3001: YINNPHTAFV RRYARRLFLH LCGSKTQYYS VRDSWQFSNE VKNLYKHVEK SGGFENNVSY ERSVKIVKSL STIAEVAVAR PRNWQKYCLR HGDFLSFLLN
3101: GVFHFAEESV IQTLKLLNLA FYQGKDVSSS VQKAEATEVV TGSNRSGSQS VDSKKKKKGE DGHDSGLEKL YVDMEGVVDI FSANCGDLLR QFIDFFLLEW
3201: NSSSVRTEAK SVIYGLWHHG RHSFKESLLA ALLQKVRYLP AYGQNIVEYT ELVSLLLDKA PENNSKQAIN ELVDRCLNPD VIRCFFETLH SQNELIANHP
3301: NSRIYSTLGN LVEFDGYYLE SEPCVACSSP DVPYSKMKLE SLKSETKFTD NRIIVKCTGS YTIQSVTMNV HDARKSKSVK VLNLYYNNRP VSDLSELKNN
3401: WSLWKRAKSC HLSFNQTELK VEFPIPITAC NFMIELDSFY ENLQALSLEP LQCPRCSRPV TDKHGICSNC HENAYQCRQC RNINYENLDS FLCNECGYSK
3501: YGRFEFNFMA KPSFIFDNME NDEDMKKGLA AIESESENAH KRYQQLLGFK KPLLKIVSSI GETEMDSQHK DTVQQMMASL PGPSCKINRK IALLGVLYGE
3601: KCKAAFDSVS KSVQTLQGLR RVLMSYLHQK NSNFSSGASR CVVSKTPNNC YGCATTFVTQ CLEILQVLSK HPRSRKQLVA AGILSELFEN NIHQGPKTAR
3701: AQARAALSTF SEGDLSAVNE LNNLVQKKIM YCLEHHRSMD IALATREEML LLSEVCSLTD EFWESRLRLV FQLLFSSIKL GAKHPAISEH IILPCLKIIS
3801: VACTPPKPDT AEKEQTMGKS APAVQEKDEN AAGVIKYSSE SEENNLNVSQ KTRDIQLVSY LEWEKGASYL DFVRRQYKAS QSIRGASQKS RTHRSDFLAL
3901: KYTLRWKRRS SRTSKGGLQA FELGSWVTEL ILSACSQSIR SEMCTLISLL AAQSSPRRYR LINLLIGLLP ATLAAGESSA EYFELLFKMI ETQDALLFLT
4001: VRGCLTTICK LISQEVGNIE SLERSLQIDI SQGFTLHKLL ELLGKFLEVP NIRSRFMRDN LLSHVLEALI VIRGLIVQKT KLINDCNRRL KDLLDGLLLE
4101: SSENKRQFIR ACVSGLQTHA EENKGRTCLF ILEQLCNLIC PSKPEAVYML ILNKSHTQEE FIRGSMTKNP YSSAEIGPLM RDVKNKICQQ LDLLGLLEDD
4201: YGMELLVAGN IISLDLSIAQ VYELVWKKSN QSSTSLTNSA LLASNAAPSR DCPPMTVTYR LQGLDGEATE PMIKELEEDR EESQDPEIEF AIAGAVREYG
4301: GLEILLDMIK SLQDDFKSNQ EEMVAVLDLL NHCCKIRENR RALLRLGALS LLLETARRAF SVDAMEPAEG ILLIVESLTL EANESDSISA AQSALTVSNE
4401: ETGTWEQAKK IVLMFLERLS HPSGLKKSNK QQRNTEMVAR ILPYLTYGEP AAMEALIEHF SPYLQNWSEF DQLQQRHEED PKDDSIAQQA AKQRFTVENF
4501: VRVSESLKTS SCGERLKDIV LENGIIAVAV KHIKEIFAIT GQTGFKSSKE WLLALKLPSV PLILSMLRGL SMGHLPTQTC IDEGGILTLL HALEGVSGEN
4601: DIGARAENLL DTLADKEGKG DGFLGEKVRA LRDATKDEMR RRALRKREEL LQGLGMRQEL SSDGGERIVV SQPILEGFED VEEEEDGLAC MVCREGYKLR
4701: PSDLLGVYSY SKRVNLGVGN SGSARGECVY TTVSYFNIIH FQCHQEAKRA DAALKNPKKE WEGAMLRNNE SLCNSLFPVK GPSVPLAQYL RYVDQYWDNL
4801: NALGRADGSR LRLLTYDIVL MLARFATGAS FSADCRGGGR DSNSRFLPFM FQMARHLLDQ GGPVQRTNMA RSVSSYISSS STSTATAPSS DSRPLTPGSQ
4901: LSSTGTEETV QFMMVNSLLS ESYESWLQHR RVFLQRGIYH TFMQHAHGRV ASRAAEPTSS GGKTQDAETL TGDELLSIVK PMLVYTGMIE QLQQLFKPKK
5001: PVHIEPIKKE GTSSGVELEP WEIVMKEKLL NVKEMIGFSK ELISWLDEIN SATDLQEAFD IVGVLADVLS EGVTQCDQFV RSAIDKD
Arabidopsis Description
BIGAuxin transport protein BIG [Source:UniProtKB/Swiss-Prot;Acc:Q9SRU2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.