Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26035336
|
msms PMID:
26035336
doi
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35797 | Sorghum | nucleus | 63.44 | 61.46 |
| Zm00001d020762_P001 | Maize | nucleus | 60.75 | 51.36 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 60.22 | 41.03 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 57.8 | 40.72 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 57.53 | 40.61 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 57.26 | 40.42 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 30.65 | 38.51 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 28.76 | 32.92 |
| AT5G09540.1 | Thale cress | nucleus | 21.51 | 28.57 |
| GSMUA_Achr10P... | Banana | cytosol | 31.45 | 27.79 |
| CDY21586 | Canola | cytosol | 21.51 | 27.68 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 29.3 | 27.05 |
| Os03t0392400-01 | Rice | nucleus | 29.03 | 26.67 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 27.96 | 26.26 |
| Bra009389.1-P | Field mustard | cytosol | 19.89 | 25.26 |
| CDY69792 | Canola | cytosol | 19.89 | 25.26 |
| Bra031921.1-P | Field mustard | cytosol | 22.04 | 22.22 |
| KRH42098 | Soybean | nucleus | 27.15 | 22.2 |
| Os10t0378450-00 | Rice | plastid | 11.56 | 22.05 |
| Solyc07g007230.2.1 | Tomato | nucleus | 25.0 | 21.83 |
| CDY31322 | Canola | cytosol | 21.77 | 21.72 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 28.23 | 21.6 |
| KRH49811 | Soybean | nucleus | 26.08 | 20.59 |
| KRH10601 | Soybean | nucleus | 27.15 | 20.32 |
| AT5G64360.7 | Thale cress | nucleus | 24.19 | 19.4 |
| KRH21766 | Soybean | nucleus | 25.81 | 19.24 |
| Bra024289.1-P | Field mustard | nucleus | 22.31 | 18.08 |
| CDX84519 | Canola | nucleus | 22.85 | 17.89 |
| PGSC0003DMT400079004 | Potato | cytosol | 24.19 | 17.61 |
| CDY58269 | Canola | nucleus | 22.58 | 16.73 |
| Solyc11g006140.1.1 | Tomato | nucleus | 24.46 | 15.29 |
| Solyc11g006170.1.1 | Tomato | nucleus | 25.0 | 14.33 |
| PGSC0003DMT400073845 | Potato | cytosol | 24.73 | 14.11 |
| CDY46799 | Canola | nucleus | 14.78 | 14.03 |
| CDY45966 | Canola | nucleus | 26.88 | 13.44 |
| Bra027007.1-P | Field mustard | nucleus | 26.88 | 13.4 |
| CDY45473 | Canola | nucleus | 26.88 | 13.37 |
| Solyc01g105780.2.1 | Tomato | nucleus | 24.46 | 12.69 |
| AT1G62970.1 | Thale cress | nucleus | 26.88 | 12.55 |
| PGSC0003DMT400083794 | Potato | nucleus | 23.39 | 11.71 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:4347303 | EMBL:AK060708 | ProteinID:BAD33950.1 | ProteinID:BAF25321.1 |
| ProteinID:BAT08501.1 | InterPro:DnaJ_domain | ProteinID:EAZ45027.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | EnsemblPlantsGene:Os09g0463700 |
| EnsemblPlants:Os09t0463700-01 | PRINTS:PR01217 | PFscan:PS50076 | PANTHER:PTHR45496 | UniProt:Q69MD2 | SUPFAM:SSF46565 |
| UniParc:UPI00003FF4B5 | RefSeq:XP_015651436.1 | RefSeq:XP_015651437.1 | SEG:seg | : | : |
Description
DnaJ domain protein C69Similar to AHM1. (Os09t0463700-01)
Coordinates
chr9:+:17556989..17558591
Molecular Weight (calculated)
39499.1 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.395
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAAAARGQ AEQWMRVAEK LLVARDLEGC KEFVSQALGT DPHVPGANDL LAAADVLLAA QRRRIPNGHP DPYAVLGLDP STPASRRPDA IHAQYRRLSF
101: LLNRSHPDRP CSLSFAEAAR LVADSWAFLS DPILKSALDA ELDAAAAAAA AAAARAYHPP APMQQPQPQP PPQPTPPRAA PLPTPPRAPP QSTPPRAAPQ
201: STPPQRVAPQ PPATAAAPPI EPVAPPSPTF WTVCMSCCHI HQYDRLYEAR KVLCPSCRQP FVAEEMAEPP PIVPGTDMYY CTWGFFPVGF PGCPGFEKLI
301: SSQQHGTDQP NTPWLGTTGG AEADGVAGAE NGAPVSAAVE VQSVPKPAKP VRVKVGAKKR GRPKGSKNKK NL
101: LLNRSHPDRP CSLSFAEAAR LVADSWAFLS DPILKSALDA ELDAAAAAAA AAAARAYHPP APMQQPQPQP PPQPTPPRAA PLPTPPRAPP QSTPPRAAPQ
201: STPPQRVAPQ PPATAAAPPI EPVAPPSPTF WTVCMSCCHI HQYDRLYEAR KVLCPSCRQP FVAEEMAEPP PIVPGTDMYY CTWGFFPVGF PGCPGFEKLI
301: SSQQHGTDQP NTPWLGTTGG AEADGVAGAE NGAPVSAAVE VQSVPKPAKP VRVKVGAKKR GRPKGSKNKK NL
001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG KETYVRSNKK
301: HGVEEVQNVE SISSASNHAV SIASNAAAVG SSTGVMSKPG SYITRKRMGT GAKNLGRLDL NVEFSNEVEE PGVAGGGNAG NGIGSNREVD NMEGIGFFEG
401: LDEFLNSLPI LSVVGDDKIK AT
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG KETYVRSNKK
301: HGVEEVQNVE SISSASNHAV SIASNAAAVG SSTGVMSKPG SYITRKRMGT GAKNLGRLDL NVEFSNEVEE PGVAGGGNAG NGIGSNREVD NMEGIGFFEG
401: LDEFLNSLPI LSVVGDDKIK AT
Arabidopsis Description
AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.