Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029651_P001 | Maize | plastid | 67.33 | 69.66 |
| OQU92285 | Sorghum | extracellular | 40.0 | 68.18 |
| Os06t0129300-01 | Rice | cytosol | 43.33 | 43.05 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:107276299 | MapMan:35.2 | UniProt:A0A0P0XWE9 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ProteinID:BAT11702.1 | InterPro:Cell_div_Cdc14 | GO:GO:0003674 | GO:GO:0005488 | InterPro:IPR011989 | EnsemblPlantsGene:Os10g0520900 |
| EnsemblPlants:Os10t0520900-00 | PFAM:PF08045 | PANTHER:PTHR34065 | PANTHER:PTHR34065:SF2 | SUPFAM:SSF48371 | UniParc:UPI00018F1517 |
| RefSeq:XP_015613437.1 | SEG:seg | : | : | : | : |
Description
Hypothetical conserved gene. (Os10t0520900-00)
Coordinates
chr10:+:20147963..20150864
Molecular Weight (calculated)
32562.2 Da
IEP (calculated)
6.760
GRAVY (calculated)
-0.017
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGAAAGDEA AAAAGGRRPT ASERRRMYRD LAQSLRCGLR DASAGFSFLR LRGLRALLRA LRSAAAADAD ARLFRHSQAL RDLQVVPVLF EHSLRRAQGD
101: AVVTVGQVLG ISPAVKLSNP ATDSEVALAL RVLEGCCLLC RDCAAAAHRY DAVKVLLNIL MTRGTLEQKA CLDTLLALMV DSSENLMDFK EHEGLDKIGD
201: LVKDTQRDDN VRLKCAEFLL LFSRSASEKG DATFVSCMQE DLKNIVGENC ASFICSKIFF SSTLDSEVTE PELNIHAKHV LDLLDGRQYA TVPQQGVVSP
101: AVVTVGQVLG ISPAVKLSNP ATDSEVALAL RVLEGCCLLC RDCAAAAHRY DAVKVLLNIL MTRGTLEQKA CLDTLLALMV DSSENLMDFK EHEGLDKIGD
201: LVKDTQRDDN VRLKCAEFLL LFSRSASEKG DATFVSCMQE DLKNIVGENC ASFICSKIFF SSTLDSEVTE PELNIHAKHV LDLLDGRQYA TVPQQGVVSP
001: MYLKRPIWSD GASATPENPS ESETGEESDA ASMVVEELVT SLNTQRLYRE LTLSLRTGLR DACAEFSFLR IRGLRSLLKT LRTVADSDSI IRLFSHTQTI
101: SDLQLVPVLF QHSLKEAEDD KVTSLDHIFS VEPMKITSPS TDAEVAVALR VLEGCCLLHP QSTVLAHKHG AVRVMMNVLS TRGVLEQGAC LDALISVLLD
201: SSANQVDFGA CNGIEEVAML MRDKQADENL RLRCGEFLLL LVGHVNGKDR SPIASVNEDI RRLLGEKSAS LIWAASQFGS TGDPEQRITA LHIQAGRVLE
301: SLDLY
101: SDLQLVPVLF QHSLKEAEDD KVTSLDHIFS VEPMKITSPS TDAEVAVALR VLEGCCLLHP QSTVLAHKHG AVRVMMNVLS TRGVLEQGAC LDALISVLLD
201: SSANQVDFGA CNGIEEVAML MRDKQADENL RLRCGEFLLL LVGHVNGKDR SPIASVNEDI RRLLGEKSAS LIWAASQFGS TGDPEQRITA LHIQAGRVLE
301: SLDLY
Arabidopsis Description
ISI1ISI1 [Source:UniProtKB/TrEMBL;Acc:A0A178URL9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.