Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0392400-01 | |
| Os07t0620200-01 | |
| Os09t0463700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | Os03t0392400-01 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | Os07t0620200-01 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | Os09t0463700-01 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0128450-00 | Rice | nucleus | 90.21 | 97.56 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 67.92 | 66.13 |
| OQU78645 | Sorghum | nucleus | 74.1 | 65.95 |
| HORVU5Hr1G045170.2 | Barley | nucleus, plastid | 59.49 | 65.72 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 67.47 | 65.12 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 68.98 | 64.51 |
| Zm00001d041005_P001 | Maize | nucleus | 63.1 | 59.94 |
| Os05t0490700-01 | Rice | extracellular | 54.97 | 54.32 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 5.87 | 51.32 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 55.27 | 49.86 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 44.58 | 47.9 |
| Bra009408.1-P | Field mustard | nucleus | 36.9 | 47.85 |
| KRH56252 | Soybean | nucleus | 14.46 | 45.07 |
| Bra028776.1-P | Field mustard | nucleus | 41.27 | 43.15 |
| CDX80930 | Canola | nucleus | 41.27 | 42.55 |
| Bra005829.1-P | Field mustard | nucleus | 41.27 | 42.48 |
| CDY11319 | Canola | nucleus | 41.27 | 42.48 |
| CDX68245 | Canola | nucleus | 42.47 | 42.34 |
| CDY61331 | Canola | nucleus | 42.47 | 42.15 |
| CDY11129 | Canola | nucleus | 42.47 | 42.15 |
| Solyc09g082050.2.1 | Tomato | nucleus | 40.96 | 42.04 |
| AT1G73100.1 | Thale cress | nucleus | 42.02 | 41.7 |
| Os11t0602200-01 | Rice | nucleus | 51.05 | 41.7 |
| KRH62706 | Soybean | nucleus | 41.87 | 41.68 |
| CDX96449 | Canola | nucleus | 41.11 | 41.55 |
| AT2G05900.1 | Thale cress | cytoskeleton, cytosol, nucleus | 19.43 | 41.35 |
| PGSC0003DMT400077329 | Potato | nucleus | 41.72 | 41.28 |
| Bra009409.1-P | Field mustard | nucleus | 41.27 | 41.2 |
| VIT_13s0047g00120.t01 | Wine grape | nucleus | 44.28 | 41.06 |
| KRH13229 | Soybean | nucleus | 41.57 | 41.01 |
| CDX98805 | Canola | nucleus | 40.36 | 40.92 |
| KRH66648 | Soybean | nucleus | 43.52 | 40.82 |
| KRH20576 | Soybean | nucleus | 41.27 | 40.71 |
| CDY59935 | Canola | nucleus | 40.36 | 40.67 |
| Bra016018.1-P | Field mustard | nucleus | 41.27 | 40.47 |
| AT5G04940.2 | Thale cress | nucleus | 40.81 | 40.45 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 44.58 | 40.16 |
| Solyc10g077070.1.1 | Tomato | nucleus | 42.47 | 39.5 |
| PGSC0003DMT400018512 | Potato | nucleus | 42.47 | 39.28 |
| CDX98804 | Canola | nucleus | 36.14 | 39.15 |
| Os03t0320400-01 | Rice | nucleus | 30.27 | 37.64 |
| CDY14135 | Canola | nucleus | 40.66 | 37.4 |
| KRG95012 | Soybean | plastid | 26.81 | 36.48 |
| AT1G17770.1 | Thale cress | nucleus | 34.94 | 33.48 |
| CDY66122 | Canola | nucleus | 33.58 | 31.23 |
| CDY26218 | Canola | nucleus | 32.53 | 30.95 |
| Os08t0565700-01 | Rice | nucleus | 27.41 | 30.64 |
| Os07t0435900-01 | Rice | nucleus | 31.02 | 30.12 |
| Os01t0927000-01 | Rice | nucleus | 29.97 | 30.02 |
| AT2G24740.1 | Thale cress | nucleus | 33.89 | 29.8 |
| CDY56214 | Canola | nucleus | 34.34 | 28.75 |
| CDX70182 | Canola | nucleus | 41.11 | 26.98 |
| Os01t0772150-00 | Rice | nucleus | 12.65 | 24.85 |
| Bra004258.1-P | Field mustard | nucleus | 34.19 | 24.7 |
| Bra025949.1-P | Field mustard | nucleus | 32.68 | 24.3 |
| CDY26221 | Canola | nucleus | 32.68 | 24.25 |
| Os09t0362900-01 | Rice | mitochondrion, nucleus | 31.78 | 22.91 |
| Os04t0544100-01 | Rice | nucleus | 27.26 | 21.52 |
| Os08t0400200-00 | Rice | nucleus | 28.92 | 16.37 |
| Os02t0708600-01 | Rice | nucleus | 12.5 | 14.74 |
| Os02t0621100-01 | Rice | nucleus | 15.66 | 14.04 |
| CDY01852 | Canola | plasma membrane | 35.54 | 12.72 |
| Os08t0399300-00 | Rice | nucleus | 12.95 | 9.86 |
| Os08t0400000-01 | Rice | mitochondrion | 13.7 | 9.82 |
| Os04t0692900-01 | Rice | nucleus | 4.67 | 7.03 |
| Os02t0708500-01 | Rice | cytosol | 3.01 | 4.59 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | EntrezGene:107277010 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 |
| UniProt:A0A0P0XYC1 | ProteinID:BAT12524.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016571 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 |
| InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 |
| InterPro:IPR036987 | EnsemblPlantsGene:Os11g0131600 | EnsemblPlants:Os11t0131600-00 | PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 |
| PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF369 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 |
| SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 |
| UniParc:UPI0003939A59 | RefSeq:XP_015615626.1 | SEG:seg | : | : | : |
Description
SET protein 40, SUVH Histone Methyltransferase 11Similar to YDG/SRA domain containing protein. (Os11t0131600-00)
Coordinates
chr11:-:1439580..1441577
Molecular Weight (calculated)
74540.6 Da
IEP (calculated)
7.244
GRAVY (calculated)
-0.600
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSEDEAES DKLPLDLEPL RSLAPKFPTI LGYDVETQST DPLLVYATPS IPCSSSEQPQ EAPASFSLPL PKSPVPIKAT PISAAFPTPQ HEDESSDQDY
101: KPFCKNKKPA MPKRAKRPQQ AEKSNDANIK RRSIRRNLDN EFNLCSSSSD NPKESVEGIL MMFDSLRRRV LQLDEKEDAS RRADLKAGTL MMQNNLRINN
201: HKMIGHVPGV EVGDIFFFRI EMCIVGLHAP AMGGIDYISS KNKDETLAVC IISSGGYEND DDDTDILVYT GQGGNSRHKE KHDQKLERGN LALMNSKSKK
301: NQIRVVRSAQ DPFCNSGKIY IYDGLYRIED TWTDTAKNGF NVFKYKLRRD PGQPDGISLW KMTEKWKANP ATREKAILLD LSSKVEHLPV CLVNDVDDEK
401: GPSHFNYVAG VKYLRPLRKT KPLQCCKCPS VCLPGDPNCS CAQQNGGDLP YSATGLLAKH TPMVYECSSN CQCSHNCRNR ITQKGIKLNF EVFWTGDRGW
501: GLRSWDPIRA GTFICEYAGE VIDETKMDID VEEDKYTFRA SCPGNKALSW NLGEELLEEK STAVITKNFK KLPIIIRANN EGNVARFLNH SCSPNLLWQA
601: VQYDHGDDSY PHIMFFAMEH IPPMTELTYD YGTRGAPPGF EGKPFKACKL KSCLCGSKHC RGLF
101: KPFCKNKKPA MPKRAKRPQQ AEKSNDANIK RRSIRRNLDN EFNLCSSSSD NPKESVEGIL MMFDSLRRRV LQLDEKEDAS RRADLKAGTL MMQNNLRINN
201: HKMIGHVPGV EVGDIFFFRI EMCIVGLHAP AMGGIDYISS KNKDETLAVC IISSGGYEND DDDTDILVYT GQGGNSRHKE KHDQKLERGN LALMNSKSKK
301: NQIRVVRSAQ DPFCNSGKIY IYDGLYRIED TWTDTAKNGF NVFKYKLRRD PGQPDGISLW KMTEKWKANP ATREKAILLD LSSKVEHLPV CLVNDVDDEK
401: GPSHFNYVAG VKYLRPLRKT KPLQCCKCPS VCLPGDPNCS CAQQNGGDLP YSATGLLAKH TPMVYECSSN CQCSHNCRNR ITQKGIKLNF EVFWTGDRGW
501: GLRSWDPIRA GTFICEYAGE VIDETKMDID VEEDKYTFRA SCPGNKALSW NLGEELLEEK STAVITKNFK KLPIIIRANN EGNVARFLNH SCSPNLLWQA
601: VQYDHGDDSY PHIMFFAMEH IPPMTELTYD YGTRGAPPGF EGKPFKACKL KSCLCGSKHC RGLF
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.