Factsheet for Os11t0602200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
nucleus: 23303719
nucleus: 23777608
nucleus: 26035336

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 23303719 doi

Q He, L Chen, Y Xu, W Yu

State Key Laboratory for Agrobiotechnology, Institute of Plant Molecular Biology and Agricultural Biotechnology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0392400-01
Os07t0620200-01
Os09t0463700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Os03t0392400-01	AT5G09540.1	21798944
AT1G73100.1	Os07t0620200-01	AT5G09540.1	21798944
AT1G73100.1	Os09t0463700-01	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G280000.1	Wheat	nucleus	72.94	81.79
TraesCS3A01G385200.1	Wheat	plastid	71.34	79.89
TraesCS4D01G278500.1	Wheat	nucleus	80.07	79.49
TraesCS4A01G023500.1	Wheat	nucleus	80.69	78.66
HORVU4Hr1G074120.1	Barley	nucleus	79.58	77.02
EER96081	Sorghum	nucleus	78.6	76.99
TraesCS3D01G378200.1	Wheat	plastid	64.7	76.79
EES10399	Sorghum	nucleus	77.24	76.68
TraesCS3B01G417400.1	Wheat	nucleus	78.35	76.47
Zm00001d019195_P001	Maize	nucleus	77.86	73.95
CDY04931	Canola	cytosol, extracellular, nucleus	5.41	57.89
GSMUA_Achr5P27620_001	Banana	nucleus	42.8	56.31
Os05t0490700-01	Rice	extracellular	44.53	53.87
Bra009408.1-P	Field mustard	nucleus	33.09	52.54
Os12t0128450-00	Rice	nucleus	39.61	52.44
Os11t0131600-00	Rice	nucleus	41.7	51.05
KRH56252	Soybean	nucleus	13.04	49.77
Os01t0811300-01	Rice	nucleus, plasma membrane	44.16	48.78
Bra028776.1-P	Field mustard	nucleus	37.02	47.4
CDY11319	Canola	nucleus	37.15	46.82
Bra005829.1-P	Field mustard	nucleus	37.02	46.67
Solyc09g082050.2.1	Tomato	nucleus	37.02	46.52
AT5G04940.2	Thale cress	nucleus	38.13	46.27
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	17.71	46.15
CDX80930	Canola	nucleus	36.53	46.12
CDX68245	Canola	nucleus	37.76	46.1
Os03t0320400-01	Rice	nucleus	30.26	46.07
AT1G73100.1	Thale cress	nucleus	37.76	45.89
CDY11129	Canola	nucleus	37.76	45.89
CDX96449	Canola	nucleus	37.02	45.81
CDY61331	Canola	nucleus	37.64	45.74
KRH20576	Soybean	nucleus	37.76	45.62
VIT_13s0047g00120.t01	Wine grape	nucleus	40.1	45.53
CDX98805	Canola	nucleus	36.65	45.5
KRH13229	Soybean	nucleus	37.64	45.47
PGSC0003DMT400077329	Potato	nucleus	37.39	45.31
Bra009409.1-P	Field mustard	nucleus	36.78	44.96
CDY59935	Canola	nucleus	36.16	44.61
Bra016018.1-P	Field mustard	nucleus	37.02	44.46
KRH62706	Soybean	nucleus	36.41	44.38
CDX98804	Canola	nucleus	32.35	42.9
VIT_08s0040g00360.t01	Wine grape	nucleus	38.25	42.2
KRH66648	Soybean	nucleus	36.65	42.09
CDY14135	Canola	nucleus	36.9	41.55
Solyc10g077070.1.1	Tomato	nucleus	35.55	40.48
PGSC0003DMT400018512	Potato	nucleus	35.55	40.25
KRG95012	Soybean	plastid	22.88	38.11
CDY26218	Canola	nucleus	32.6	37.97
AT1G17770.1	Thale cress	nucleus	31.61	37.09
CDY66122	Canola	nucleus	31.98	36.41
AT2G24740.1	Thale cress	nucleus	31.98	34.44
CDY56214	Canola	nucleus	31.86	32.66
Os08t0565700-01	Rice	nucleus	22.51	30.81
Bra025949.1-P	Field mustard	nucleus	32.96	30.01
CDY26221	Canola	nucleus	32.6	29.61
CDX70182	Canola	nucleus	36.78	29.55
Os07t0435900-01	Rice	nucleus	24.6	29.24
Os01t0927000-01	Rice	nucleus	23.74	29.11
Bra004258.1-P	Field mustard	nucleus	31.98	28.29
Os01t0772150-00	Rice	nucleus	10.46	25.15
Os09t0362900-01	Rice	mitochondrion, nucleus	26.08	23.02
Os04t0544100-01	Rice	nucleus	22.26	21.52
Os08t0400200-00	Rice	nucleus	25.46	17.65
Os02t0621100-01	Rice	nucleus	14.88	16.33
Os02t0708600-01	Rice	nucleus	10.7	15.45
CDY01852	Canola	plasma membrane	33.33	14.6
Os08t0399300-00	Rice	nucleus	12.18	11.35
Os08t0400000-01	Rice	mitochondrion	12.42	10.9
Os04t0692900-01	Rice	nucleus	3.94	7.26
Os02t0708500-01	Rice	cytosol	1.85	3.44
CDX86631	Canola	cytosol	0.12	1.23
CDY21127	Canola	cytosol	0.12	1.23
CDX89821	Canola	cytosol	0.12	1.23
CDY53193	Canola	mitochondrion	0.12	0.71

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:4350865
ProteinID:ABA94594.1	EMBL:AK102379	InterPro:AT_hook_DNA-bd_motif	ProteinID:BAF28592.1	ProteinID:BAT14760.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	EnsemblPlantsGene:Os11g0602200	EnsemblPlants:Os11t0602200-01	PFAM:PF00856	PFAM:PF02178	PFAM:PF02182
PFAM:PF05033	PRINTS:PR00929	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF479	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
UniProt:Q2R1K5	InterPro:SET_dom	SMART:SM00317	SMART:SM00384	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0000681EFA	RefSeq:XP_015616962.1
RefSeq:XP_015616963.1	SEG:seg	:	:	:	:

Description

SET protein 41, SUVH Histone Methyltransferase 1Similar to SET domain protein SDG111. (Os11t0602200-01);Similar to SET1. (Os11t0602200-02)

Coordinates

chr11:+:23158472..23164209

Molecular Weight (calculated)

89219.9 Da

IEP (calculated)

8.678

GRAVY (calculated)

-0.528

Length

813 amino acids

Sequence
(BLAST)

001: MAGTRQTTSV PMDNAAVVDA KPLRTLTPMF PAALGLHTFT AKENSSSIVC ITPFGPYAGG TEQAMPASIP PMFASPAAPA DPNQRQPYAV HLNGAAPANG
101: TANNTGVIPD LQIAVAGTVE SAKRKRGRPK RVQDSSVPSA HLVPSAPGGN ITAVQTPPSA TTDESGKKKR GRPKRVQDVP VLSTPSAPQV DSTVFQTPAS
201: AVNESVTRKR GRPRRVQDGA DTSAPPIQSK YNEPVLQTPS AVTLPEDGKR KRGRPKRVPD GALIPLSHSG VSIDDDSGEI ITGKRGRPRK IDVNLLNLPS
301: LFSDDPRESV DNVLMMFDAL RRRLMQLDEV KQGAKQQHNL KAGSIMMSAE LRANKNKRIG EVPGVEVGDM FYFRIEMCLV GLNSQSMSGI DYMSAKFGNE
401: EDPVAISIVS AGVYENTEDD PDVLVYTGQG MSGKDDQKLE RGNLALERSL HRGNQIRVVR SVRDLTCPTG KIYIYDGLYK IREAWVEKGK TGFNVFKHKL
501: LREPGQPDGI AVWKKTEKWR ENPSSRDHVI LRDISYGAES KPVCLVNEVD DEKGPSHFNY TTKLNYRNSL SSMRKMQGCN CASVCLPGDN NCSCTHRNAG
601: DLPYSASGIL VSRMPMLYEC NDSCTCSHNC RNRVVQKGSQ IHFEVFKTGD RGWGLRSWDP IRAGTFICEY AGEVIDRNSI IGEDDYIFET PSSEQNLRWN
701: YAPELLGEPS LSDSSETPKQ LPIIISAKRT GNIARFMNHS CSPNVFWQPV LYDHGDEGYP HIAFFAIKHI PPMTELTYDY GQSQGNVQLG INSGCRKSKN
801: CLCWSRKCRG SFG

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.