Factsheet for Os12t0128450-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0392400-01
Os07t0620200-01
Os09t0463700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Os03t0392400-01	AT5G09540.1	21798944
AT1G73100.1	Os07t0620200-01	AT5G09540.1	21798944
AT1G73100.1	Os09t0463700-01	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0131600-00	Rice	nucleus	97.56	90.21
HORVU5Hr1G045170.2	Barley	nucleus, plastid	64.17	65.56
TraesCS5A01G140500.1	Wheat	nucleus	69.71	62.76
OQU78645	Sorghum	nucleus	75.57	62.2
TraesCS5D01G152000.1	Wheat	nucleus	69.06	61.63
TraesCS5B01G138800.1	Wheat	nucleus	70.68	61.13
Zm00001d041005_P001	Maize	nucleus	63.52	55.79
Os05t0490700-01	Rice	extracellular	56.19	51.34
CDY04931	Canola	cytosol, extracellular, nucleus	6.35	51.32
Bra009408.1-P	Field mustard	nucleus	39.9	47.85
Os01t0811300-01	Rice	nucleus, plasma membrane	56.03	46.74
KRH56252	Soybean	nucleus	15.64	45.07
GSMUA_Achr5P27620_001	Banana	nucleus	44.79	44.5
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	20.85	41.03
Bra028776.1-P	Field mustard	nucleus	42.02	40.63
CDX80930	Canola	nucleus	42.02	40.06
CDY11319	Canola	nucleus	42.02	40.0
Bra005829.1-P	Field mustard	nucleus	42.02	40.0
KRH62706	Soybean	nucleus	43.32	39.88
CDX68245	Canola	nucleus	43.16	39.79
CDY11129	Canola	nucleus	43.16	39.61
CDY61331	Canola	nucleus	43.16	39.61
Os11t0602200-01	Rice	nucleus	52.44	39.61
Solyc09g082050.2.1	Tomato	nucleus	41.37	39.26
AT1G73100.1	Thale cress	nucleus	42.51	39.01
CDX96449	Canola	nucleus	41.69	38.97
VIT_13s0047g00120.t01	Wine grape	nucleus	45.28	38.83
KRH13229	Soybean	nucleus	42.51	38.78
Bra009409.1-P	Field mustard	nucleus	41.69	38.5
KRH20576	Soybean	nucleus	42.18	38.48
CDX98805	Canola	nucleus	41.04	38.47
PGSC0003DMT400077329	Potato	nucleus	42.02	38.45
KRH66648	Soybean	nucleus	44.14	38.28
CDY59935	Canola	nucleus	40.88	38.09
Bra016018.1-P	Field mustard	nucleus	41.86	37.96
VIT_08s0040g00360.t01	Wine grape	nucleus	45.44	37.86
AT5G04940.2	Thale cress	nucleus	41.04	37.61
Solyc10g077070.1.1	Tomato	nucleus	42.51	36.55
CDX98804	Canola	nucleus	36.32	36.38
PGSC0003DMT400018512	Potato	nucleus	42.51	36.35
Os03t0320400-01	Rice	nucleus	31.27	35.96
CDY14135	Canola	nucleus	41.53	35.32
KRG95012	Soybean	plastid	25.9	32.58
AT1G17770.1	Thale cress	nucleus	36.32	32.18
CDY66122	Canola	nucleus	35.5	30.53
Os08t0565700-01	Rice	nucleus	28.99	29.97
CDY26218	Canola	nucleus	34.04	29.94
Os01t0927000-01	Rice	nucleus	31.92	29.56
Os07t0435900-01	Rice	nucleus	32.9	29.53
AT2G24740.1	Thale cress	nucleus	35.5	28.87
CDY56214	Canola	nucleus	35.99	27.87
CDX70182	Canola	nucleus	41.53	25.2
Os01t0772150-00	Rice	nucleus	13.68	24.85
Bra004258.1-P	Field mustard	nucleus	35.83	23.94
Bra025949.1-P	Field mustard	nucleus	33.71	23.18
CDY26221	Canola	nucleus	33.71	23.13
Os09t0362900-01	Rice	mitochondrion, nucleus	33.88	22.58
Os04t0544100-01	Rice	nucleus	28.99	21.17
Os08t0400200-00	Rice	nucleus	30.78	16.11
Os02t0708600-01	Rice	nucleus	13.52	14.74
Os02t0621100-01	Rice	nucleus	16.94	14.04
CDY01852	Canola	plasma membrane	36.81	12.18
Os08t0400000-01	Rice	mitochondrion	14.33	9.49
Os08t0399300-00	Rice	nucleus	12.87	9.06
Os04t0692900-01	Rice	nucleus	5.05	7.03
Os02t0708500-01	Rice	cytosol	1.95	2.75
CDX89821	Canola	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDX86631	Canola	cytosol	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:107277287	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10
UniProt:A0A0P0Y6F9	ProteinID:BAT15716.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	EnsemblPlantsGene:Os12g0128450	EnsemblPlants:Os12t0128450-00	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884
PANTHER:PTHR22884:SF369	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI000393891C	RefSeq:XP_015618488.1	RefSeq:XP_015618489.1	:	:	:

Description

Similar to YDG/SRA domain containing protein. (Os12t0128450-00)

Coordinates

chr12:-:1351874..1353721

Molecular Weight (calculated)

69067.3 Da

IEP (calculated)

8.105

GRAVY (calculated)

-0.604

Length

614 amino acids

Sequence
(BLAST)

001: MPHHSSQQPQ EAPASFSLPL PKSPVPIKAT PISAAFPTPQ HEDESSDQDY KPFCRQKKPT LPKRAKRPQQ AEKSNDANIK RRSIRRSLDN EFNLCSSSSD
101: NPKESVEGIL MMFDSLRRRV LQLDEKEDAS RRADLKAGTL MMQNNLRINN HKMIGHVPGV EVGDIFFFRI EMCIIGLHAP AMGGIDYISS KNKDETLAVC
201: IISSGGYEND DDDTDILVYT GQGGNSRHKE KHDQKLERGN LALMNSKIKK NQIRVVRSAQ DPFCNSGKIY IYDGLYRIED TWTDTAKNGF NVFKYKLRRD
301: PGQPDGISLW KMTEKWKANP ATREKAILLD LSSKVEHLPV CLVNDVDDEK GPSHFNYVAG VKYLRPLRKT KPLQCCKCPS VCLPGDPNCS CAQQNGGDLP
401: YSATGLLAKH TPMVYECSSN CQCSHNCRNR ITQKGIKLNF EVFWTGDRGW GLRSWDPIRA GTFICEYAGE VIDETKMDID VEEDKYTFCA SCPGDKALSW
501: NLGAELLEEK STAVTTKNFK KLPIIIRANN EGNVARFLNH SCSPNLLWQA VQYDHGDDSY PHIMFFAMEH IPPMTELTYD YGTRGAPPGF EGKPFKACKL
601: KSCLCGSKHC RGLF

Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)

001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT

Arabidopsis Description

SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.