Factsheet for PGSC0003DMT400008543

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008548	Potato	extracellular, mitochondrion, plasma membrane, plastid	74.39	62.37
PGSC0003DMT400077055	Potato	endoplasmic reticulum	61.46	49.12
PGSC0003DMT400008555	Potato	endoplasmic reticulum, plasma membrane	60.98	49.02
PGSC0003DMT400068626	Potato	mitochondrion	21.22	47.28
CDY28486	Canola	cytosol	20.24	46.11
PGSC0003DMT400030215	Potato	cytosol	26.83	42.97
PGSC0003DMT400064225	Potato	cytosol, mitochondrion	39.27	40.55
VIT_18s0001g09650.t01	Wine grape	endoplasmic reticulum	49.76	40.24
PGSC0003DMT400039835	Potato	cytosol	34.15	37.84
CDX69819	Canola	endoplasmic reticulum, golgi	43.17	35.61
CDX97037	Canola	endoplasmic reticulum	42.93	35.34
Bra009019.1-P	Field mustard	endoplasmic reticulum	42.68	35.07
CDX69817	Canola	endoplasmic reticulum	42.44	34.87
Bra009020.1-P	Field mustard	endoplasmic reticulum, plasma membrane	42.2	34.81
AT5G10610.1	Thale cress	endoplasmic reticulum	42.44	34.8
AT5G10600.1	Thale cress	plasma membrane	42.93	34.11
PGSC0003DMT400055478	Potato	endoplasmic reticulum	41.22	33.27
PGSC0003DMT400055477	Potato	endoplasmic reticulum	41.46	33.14
PGSC0003DMT400008551	Potato	plasma membrane	40.49	31.03
PGSC0003DMT400030214	Potato	endoplasmic reticulum	37.56	30.26
PGSC0003DMT400039833	Potato	golgi	37.56	30.08
PGSC0003DMT400055474	Potato	endoplasmic reticulum, golgi	21.95	22.73
PGSC0003DMT400008550	Potato	endoplasmic reticulum, plasma membrane	8.29	19.21

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M0ZUQ5	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400003304	PGSC:PGSC0003DMG400003304	EnsemblPlants:PGSC0003DMT400008543
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF214	SUPFAM:SSF48264
UniParc:UPI000295FF4E	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400003304]

Coordinates

chr4:+:67547335..67549796

Molecular Weight (calculated)

47098.0 Da

IEP (calculated)

7.367

GRAVY (calculated)

-0.225

Length

410 amino acids

Sequence
(BLAST)

001: MLGDRVSFNY TAIFWAPYGQ LWRVLRRQTA IELFSSNSLQ KSSLIRNEET GILIRSLFKA SEKNTRGGTR VDLSYWAFTF VFNVMMRIGT GKSCVSEEVI
101: GMEKGKKIIE EMRSVFFANL LVLNVCDFLP ILKWFGYKGI GKKMDLTSMK RNEFLNKLLD EFRQKKSSSS SSDHGAKGKK ATLVETLLSL QEFEPEFYTD
201: DLIKSLLMVL FVAGTETTSM TIQWAMRLLL AHPKAFQKLR SEIDNNVGNE RLLNESDLTN LPYLQCVINE TLRLYSPVPL LLPHYSLEDC TVGGYDVPKN
301: TILMVNAWAI HRDPALWDEP EKFMPERFEA MEGEKEGFSY KFVPFGMGRR ACPGDNMGMR TVSLVLGSLV QWFDWKNVEL DENYSNMDEY YNSKVISSKD
401: KPFEAICIPR

Best Arabidopsis Sequence Match ( AT4G37320.1 )
(BLAST)

001: MDLTQILLLS FLFLTISIKL LLTKSNRKPN LPPSPAYPLP VIGHLHLLKQ PVHRTFHSIS KSLGNAPIFH LRLGNRLVYV ISSHSIAEEC FTKNDVVLAN
101: RPDIIMAKHV GYNFTNMIAA SYGDHWRNLR RIAAVEIFSS HRISTFSSIR KDEIRRLITH LSRDSLHGFV EVELKSLLTN LAFNNIIMMV AGKRYYGTGT
201: EDNDEAKLVR ELIAEIMAGA GSGNLADYLP SINWVTNFEN QTKILGNRLD RVLQKLVDEK RAEKEKGQTL IDHLLSFQET EPEYYTDVII KGIILALVLA
301: GTDTSSVTLE WAMSNLLNHP EILEKARAEI DDKIGSDRLV EESDIVNLHY LQNIVSETLR LYPAVPLLLP HFSSDECKVA GYDMPRRTLL LTNVWAMHRD
401: PGLWEEPERF KPERFEKEGE ARKLMPFGMG RRACPGAELG KRLVSLALGC LIQSFEWERV GAELVDMTEG EGITMPKATP LRAMCKARAI VGKTI

Arabidopsis Description

CYP81D5Cytochrome P450, family 81, subfamily D, polypeptide 5 [Source:UniProtKB/TrEMBL;Acc:O23156]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.