Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 4
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g083720.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 93.63 | 79.92 |
| KRH28808 | Soybean | cytosol, golgi, plasma membrane | 58.24 | 50.0 |
| KRH76645 | Soybean | cytosol, golgi, plasma membrane | 58.46 | 49.72 |
| PGSC0003DMT400053117 | Potato | cytosol, golgi, plasma membrane | 24.4 | 30.33 |
| PGSC0003DMT400032417 | Potato | plasma membrane | 36.92 | 29.73 |
| PGSC0003DMT400052279 | Potato | cytosol, golgi, plasma membrane | 30.99 | 29.56 |
| PGSC0003DMT400047049 | Potato | cytosol, golgi, plasma membrane | 26.15 | 28.74 |
| PGSC0003DMT400071137 | Potato | cytosol, golgi, plasma membrane | 31.87 | 28.6 |
| PGSC0003DMT400048839 | Potato | plasma membrane | 27.69 | 27.63 |
| PGSC0003DMT400035670 | Potato | cytosol, golgi, plasma membrane | 30.99 | 27.27 |
| PGSC0003DMT400083841 | Potato | plasma membrane | 30.33 | 25.94 |
| PGSC0003DMT400077488 | Potato | plasma membrane | 33.19 | 25.64 |
| PGSC0003DMT400035548 | Potato | plasma membrane | 30.11 | 24.82 |
| PGSC0003DMT400059600 | Potato | plasma membrane | 29.67 | 24.55 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009212 | EnsemblPlantsGene:PGSC0003DMG400003574 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 |
| GO:GO:0005575 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Mlo | PANTHER:PTHR31942 | PANTHER:PTHR31942:SF9 | PFAM:PF03094 | PGSC:PGSC0003DMG400003574 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00029543B0 | UniProt:M0ZVS4 | MapMan:35.1 | : |
Description
Ccaat-binding transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400003574]
Coordinates
chr2:-:39242676..39247920
Molecular Weight (calculated)
52111.2 Da
IEP (calculated)
8.015
GRAVY (calculated)
0.096
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNFKRASFA ETPTWAVATV VAVLVSIGFL IHGSLKKFGK WLHRTKREPL YAALEKIKEE LMVFGLLSLL MGHWIVYVAK ICVKSSAVSS HFYPCSPPRN
101: KMESAITRFA LSGSSHSNFS TSRLLLSSGH EDYCPEGLQS FASKESLEQL HRLLLVLGVS HVSYSFFAIA LAMIKLCFSR QFWSSINEAD YMALRLGFIT
201: THQLPLTYDF HKYMLRSMEE EFRDIVGIRR IIHSHIYDFV KNCYWKLILL VGTKLHRVVV KLAVESMDSS PLEGFHQFNL RDELFWFGKP RFLLRIIQFV
301: SFQNAFEMAT YIWSLWEIKG SSCFTDNHTF LVIRLSFGVV SQFWCSFVTF PLYVIVAQMG SRYKKTIVSE NVRTSLHGWR HKVKTRLEGS VVSPETLLAT
401: TSLDSMAEDE VDQIHTIATI STEVFDETLE QSCTNEISEC DELHIPLSPR NQGEV
101: KMESAITRFA LSGSSHSNFS TSRLLLSSGH EDYCPEGLQS FASKESLEQL HRLLLVLGVS HVSYSFFAIA LAMIKLCFSR QFWSSINEAD YMALRLGFIT
201: THQLPLTYDF HKYMLRSMEE EFRDIVGIRR IIHSHIYDFV KNCYWKLILL VGTKLHRVVV KLAVESMDSS PLEGFHQFNL RDELFWFGKP RFLLRIIQFV
301: SFQNAFEMAT YIWSLWEIKG SSCFTDNHTF LVIRLSFGVV SQFWCSFVTF PLYVIVAQMG SRYKKTIVSE NVRTSLHGWR HKVKTRLEGS VVSPETLLAT
401: TSLDSMAEDE VDQIHTIATI STEVFDETLE QSCTNEISEC DELHIPLSPR NQGEV
001: MEHMMKEGRS LAETPTYSVA SVVTVLVFVC FLVERAIYRF GKWLKKTRRK ALFTSLEKMK EELMLLGLIS LLLSQSARWI SEICVNSSLF NSKFYICSEE
101: DYGIHKKVLL EHTSSTNQSS LPHHGIHEAS HQCGHGREPF VSYEGLEQLL RFLFVLGITH VLYSGIAIGL AMSKIYSWRK WEAQAIIMAE SDIHAKKTKV
201: MKRQSTFVFH HASHPWSNNR FLIWMLCFLR QFRGSIRKSD YFALRLGFLT KHNLPFTYNF HMYMVRTMED EFHGIVGISW PLWVYAIVCI CINVHGLNMY
301: FWISFVPAIL VMLVGTKLEH VVSKLALEVK EQQTGTSNGA QVKPRDGLFW FGKPEILLRL IQFIIFQNAF EMATFIWFLW GIKERSCFMK NHVMISSRLI
401: SGVLVQFWCS YGTVPLNVIV TQMGSRHKKA VIAESVRDSL HSWCKRVKER SKHTRSVCSL DTATIDERDE MTVGTLSRSS SMTSLNQITI NSIDQAESIF
501: GAAASSSSPQ DGYTSRVEEY LSETYNNIGS IPPLNDEIEI EIEGEEDNGG RGSGSDENNG DAGETLLELF RRT
101: DYGIHKKVLL EHTSSTNQSS LPHHGIHEAS HQCGHGREPF VSYEGLEQLL RFLFVLGITH VLYSGIAIGL AMSKIYSWRK WEAQAIIMAE SDIHAKKTKV
201: MKRQSTFVFH HASHPWSNNR FLIWMLCFLR QFRGSIRKSD YFALRLGFLT KHNLPFTYNF HMYMVRTMED EFHGIVGISW PLWVYAIVCI CINVHGLNMY
301: FWISFVPAIL VMLVGTKLEH VVSKLALEVK EQQTGTSNGA QVKPRDGLFW FGKPEILLRL IQFIIFQNAF EMATFIWFLW GIKERSCFMK NHVMISSRLI
401: SGVLVQFWCS YGTVPLNVIV TQMGSRHKKA VIAESVRDSL HSWCKRVKER SKHTRSVCSL DTATIDERDE MTVGTLSRSS SMTSLNQITI NSIDQAESIF
501: GAAASSSSPQ DGYTSRVEEY LSETYNNIGS IPPLNDEIEI EIEGEEDNGG RGSGSDENNG DAGETLLELF RRT
Arabidopsis Description
MLO4MLO-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O23693]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.