Factsheet for PGSC0003DMT400035207

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 8
endoplasmic reticulum 5
golgi 5
vacuole 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G020100.1	Wheat	cytosol, plastid	17.44	61.26
VIT_03s0017g02260.t01	Wine grape	extracellular	29.74	59.49
VIT_03s0017g02200.t01	Wine grape	extracellular	29.23	54.55
AT4G15160.1	Thale cress	extracellular	37.69	53.45
CDY22735	Canola	extracellular	32.31	53.39
CDY59805	Canola	extracellular	32.31	53.39
Bra038089.1-P	Field mustard	extracellular	34.1	51.95
KRG90032	Soybean	extracellular	43.59	51.83
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	20.51	51.61
CDY09061	Canola	extracellular	33.59	51.17
TraesCS7A01G024100.1	Wheat	plastid	19.49	51.01
Bra037084.1-P	Field mustard	extracellular	33.59	50.19
Bra039563.1-P	Field mustard	plasma membrane	36.92	49.48
TraesCS2D01G422700.1	Wheat	extracellular	20.51	48.78
TraesCS2B01G444500.1	Wheat	extracellular	20.51	48.78
TraesCS2D01G422800.1	Wheat	extracellular, plastid	24.36	48.72
PGSC0003DMT400007468	Potato	extracellular	30.0	48.55
CDY22936	Canola	plasma membrane	36.15	48.45
KRH17654	Soybean	extracellular	47.18	47.92
CDY06505	Canola	extracellular	25.38	47.6
TraesCS2A01G424800.1	Wheat	extracellular	20.0	47.56
Bra001852.1-P	Field mustard	extracellular	31.54	47.13
TraesCS7D01G020000.1	Wheat	plastid	16.92	46.48
Os06t0168700-01	Rice	plastid	28.97	45.94
PGSC0003DMT400093516	Potato	plastid	26.92	45.85
Zm00001d026282_P001	Maize	extracellular	18.72	45.34
Zm00001d002347_P001	Maize	extracellular	16.67	44.83
Bra031329.1-P	Field mustard	extracellular	38.97	44.71
OQU82307	Sorghum	extracellular, plasma membrane	16.67	43.92
CDY47794	Canola	extracellular	24.36	42.79
PGSC0003DMT400079355	Potato	extracellular	14.87	42.34
Bra023850.1-P	Field mustard	extracellular	24.87	42.17
AT3G22120.2	Thale cress	plastid	37.69	41.88
TraesCS7A01G024200.1	Wheat	plastid	23.59	41.44
HORVU7Hr1G027440.2	Barley	extracellular	30.0	41.34
Os04t0612500-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	9.23	40.45
CDY19310	Canola	extracellular	27.69	40.0
EER89284	Sorghum	endoplasmic reticulum, vacuole	33.08	39.81
CDY39502	Canola	extracellular	27.18	39.26
TraesCS7B01G031800.1	Wheat	extracellular	30.51	37.07
HORVU2Hr1G099450.1	Barley	endoplasmic reticulum	17.44	35.42
HORVU2Hr1G099370.2	Barley	mitochondrion	21.54	31.11
HORVU2Hr1G099470.5	Barley	extracellular	29.23	24.05
AT3G22142.1	Thale cress	extracellular, plasma membrane, vacuole	32.82	8.65

Protein Annotations

Gene3D:1.10.110.10	EntrezGene:102604208	MapMan:35.1	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Hydrophob_seed	UniProt:M1B1Z7
PFAM:PF14547	EnsemblPlantsGene:PGSC0003DMG400013537	PGSC:PGSC0003DMG400013537	EnsemblPlants:PGSC0003DMT400035207	PRINTS:PR00021	PRINTS:PR01217
PANTHER:PTHR31731	PANTHER:PTHR31731:SF16	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI000296FC79	RefSeq:XP_006353733.1
SEG:seg	:	:	:	:	:

Description

Proline-rich protein [Source:PGSC_GENE;Acc:PGSC0003DMG400013537]

Coordinates

chr7:-:41143270..41145160

Molecular Weight (calculated)

41226.6 Da

IEP (calculated)

10.164

GRAVY (calculated)

-0.199

Length

390 amino acids

Sequence
(BLAST)

001: MEKFNVARVL LLLLQLGTLF IAHACPYCPY PPSTPKHPKL PPKVKPPSTQ PPHVKPPSTP KHPKDPPHVK PPSTPKHPKQ PPYVKPPTTP KHPKYPPHVK
101: PPSTPKHPPQ KPCPPPSHHG PKPPIVKPPH VPRPPIVHPP PIVSPPSTPK PPTTPPFTPK PPSPTPPIVS PPIVYPPITP TPPIVHPPVT PKPPSPTPPI
201: VSPPIVYPPI TPTPPIVHPP ITPKPPSPTP PIVSPPIVYP PITPTPPIVS PPIIPTPPIV SPPFVPNPPV VIPPPYVPSP PVVTPPIVPT PPTPCPPPPP
301: AQPTCPIDAL KLGACVDVLG GLIHIGIGGS AKQTCCPLLG GLVDLDAAIC LCTTIRLKLL NINIILPIAL QVLIDDCGKY PPKDFKCPST

Best Arabidopsis Sequence Match ( AT3G22142.1 )
(BLAST)

0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.