Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid, cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400092251 | Potato | cytosol | 30.5 | 28.81 |
| KRH45560 | Soybean | nucleus | 15.25 | 19.62 |
| KRG99455 | Soybean | nucleus | 14.66 | 19.23 |
| KRH69663 | Soybean | nucleus | 13.78 | 15.82 |
| PGSC0003DMT400024179 | Potato | cytosol | 17.01 | 15.55 |
| PGSC0003DMT400079004 | Potato | cytosol | 14.96 | 9.98 |
| KRH74501 | Soybean | nucleus | 13.2 | 9.28 |
| PGSC0003DMT400073845 | Potato | cytosol | 15.84 | 8.28 |
| PGSC0003DMT400083794 | Potato | nucleus | 17.3 | 7.94 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400041631 | EnsemblPlantsGene:PGSC0003DMG400016139 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45496 | PGSC:PGSC0003DMG400016139 |
| SEG:seg | SUPFAM:SSF46565 | UniParc:UPI0002958058 | UniProt:M1BBN4 | MapMan:35.2 | : |
Description
Dnajc14 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016139]
Coordinates
chr11:+:2381983..2383008
Molecular Weight (calculated)
39188.5 Da
IEP (calculated)
4.263
GRAVY (calculated)
-0.795
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRQYIANN IPNLKFQNYL SASELFLQQR NFEDCRIYAL KAIEIDPNQI APSQILFIAN ILLLATTTNK GPNHYFILNL PLYTHNQELI KNNFMYASNL
101: LNPNYNPYPF ASEALGYALT SWSVLSSSTQ KANFDDELKN KEKEKNTFEP NPESLWSPFV GTTKINENNV EFGIGGGNTN DKNDANEVIE ISDDEEEDEN
201: GKKDQSLRVE EKFVETNGGE VDKEEGNFKK RRIKMMGKSL NKVLGKGNKV DMNKIVYHVE GNDNFECDNA GENTNIEFEI MKDNNVELEI VEGKTHENGN
301: VGETSDNNNF ENKCMEDDDD MEFLREDIYD QMKKFYDIEF F
101: LNPNYNPYPF ASEALGYALT SWSVLSSSTQ KANFDDELKN KEKEKNTFEP NPESLWSPFV GTTKINENNV EFGIGGGNTN DKNDANEVIE ISDDEEEDEN
201: GKKDQSLRVE EKFVETNGGE VDKEEGNFKK RRIKMMGKSL NKVLGKGNKV DMNKIVYHVE GNDNFECDNA GENTNIEFEI MKDNNVELEI VEGKTHENGN
301: VGETSDNNNF ENKCMEDDDD MEFLREDIYD QMKKFYDIEF F
001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT
Arabidopsis Description
AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.