Factsheet for PGSC0003DMT400051525

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080854	Potato	endoplasmic reticulum, plasma membrane, vacuole	98.58	67.32
PGSC0003DMT400050776	Potato	cytosol	64.67	65.99
PGSC0003DMT400036507	Potato	cytosol	25.36	60.14
Zm00001d008479_P001	Maize	cytosol	28.49	56.18
VIT_00s0388g00050.t01	Wine grape	cytosol	43.87	52.38
HORVU3Hr1G002400.1	Barley	cytosol	51.0	51.88
HORVU3Hr1G002470.1	Barley	cytosol	51.0	51.88
Os01t0114900-00	Rice	cytosol	44.73	51.64
PGSC0003DMT400037783	Potato	cytosol	32.19	49.13
Os01t0117100-00	Rice	plasma membrane	50.43	48.63
PGSC0003DMT400036500	Potato	cytosol	31.62	48.26
TraesCSU01G044400.1	Wheat	plasma membrane	51.28	48.0
PGSC0003DMT400036503	Potato	cytosol	31.34	47.83
TraesCS3A01G018500.1	Wheat	plasma membrane	51.57	47.51
TraesCSU01G153700.1	Wheat	golgi, plasma membrane	51.0	47.48
TraesCSU01G156400.1	Wheat	golgi, plasma membrane	51.0	46.98
TraesCSU01G046400.1	Wheat	golgi, plasma membrane	51.0	46.98
PGSC0003DMT400078564	Potato	cytosol	31.34	46.61
Os01t0117300-00	Rice	plasma membrane	51.28	45.34
PGSC0003DMT400023448	Potato	cytosol, endoplasmic reticulum, plasma membrane	57.55	44.89
TraesCS3A01G018200.1	Wheat	plastid	51.85	43.54
PGSC0003DMT400050787	Potato	mitochondrion, plasma membrane	67.81	42.65
Zm00001d008465_P001	Maize	plastid	49.29	41.39
Os01t0117500-00	Rice	plasma membrane	51.57	38.35
PGSC0003DMT400078565	Potato	cytosol	47.86	35.37
PGSC0003DMT400078554	Potato	cytosol	48.15	34.92
Os01t0116900-00	Rice	plasma membrane	50.71	34.56
PGSC0003DMT400050786	Potato	plasma membrane	45.01	33.76
TraesCSU01G164800.1	Wheat	cytosol	50.43	33.71
TraesCSU01G165400.1	Wheat	cytosol	50.43	33.71
TraesCS3A01G013500.1	Wheat	plasma membrane	51.28	32.37
Zm00001d024962_P001	Maize	plasma membrane	51.0	31.4
GSMUA_Achr3P20890_001	Banana	plasma membrane	43.02	30.57
HORVU3Hr1G002330.7	Barley	plastid	51.0	30.13
KXG32076	Sorghum	plastid	50.43	30.0
KXG32744	Sorghum	plasma membrane	52.42	29.77
Os01t0115600-01	Rice	plasma membrane	52.42	29.63
PGSC0003DMT400031515	Potato	cytosol	42.73	29.47
TraesCS3A01G017200.1	Wheat	plasma membrane	51.85	29.35
TraesCSU01G177600.1	Wheat	plasma membrane	52.14	29.28
TraesCSU01G178300.1	Wheat	plasma membrane	52.14	29.28
TraesCS1B01G020700.3	Wheat	plasma membrane	52.42	29.16
TraesCS5B01G528200.1	Wheat	plasma membrane	51.0	29.15
TraesCS3D01G014600.1	Wheat	plasma membrane	51.28	29.03
HORVU0Hr1G006070.12	Barley	plasma membrane	51.0	29.01
PGSC0003DMT400040935	Potato	plasma membrane	48.43	28.96
HORVU3Hr1G002520.1	Barley	plasma membrane	50.71	28.9
Zm00001d008468_P001	Maize	plasma membrane	49.86	28.83
TraesCSU01G044100.2	Wheat	plasma membrane	51.28	28.8
TraesCS3A01G016700.1	Wheat	plasma membrane	51.28	28.8
TraesCS3D01G011300.1	Wheat	plasma membrane	51.28	28.8
TraesCS3D01G064100.1	Wheat	plasma membrane	51.28	28.8
TraesCS1D01G015900.1	Wheat	plasma membrane	51.28	28.71
TraesCS1A01G018000.1	Wheat	plasma membrane	51.85	28.71
Zm00001d008489_P001	Maize	plasma membrane	49.57	28.67
TraesCS3D01G011900.1	Wheat	plasma membrane	51.0	28.64
HORVU3Hr1G002270.3	Barley	plasma membrane	51.0	28.64
TraesCS3A01G012900.1	Wheat	plasma membrane	51.0	28.64
TraesCS3B01G015400.1	Wheat	plasma membrane	51.0	28.59
TraesCSU01G167800.1	Wheat	plasma membrane	51.0	28.59
TraesCS1B01G022400.1	Wheat	plasma membrane	52.14	28.59
TraesCS1D01G017800.1	Wheat	plasma membrane	51.85	28.57
Os01t0114700-00	Rice	mitochondrion, plasma membrane	51.0	28.55
EES02605	Sorghum	plasma membrane	49.86	28.5
HORVU1Hr1G002600.12	Barley	plasma membrane	51.85	28.48
TraesCS1D01G015300.1	Wheat	plasma membrane	51.28	28.39
TraesCS3D01G014000.1	Wheat	plasma membrane	50.14	28.39
TraesCS1A01G018600.1	Wheat	plasma membrane	52.14	28.37
TraesCS6A01G401300.1	Wheat	plasma membrane	50.71	28.34
HORVU3Hr1G012000.5	Barley	plasma membrane	50.14	28.16
Os01t0113800-01	Rice	plasma membrane	50.43	28.1
HORVU1Hr1G001670.2	Barley	plasma membrane	50.71	28.08
TraesCSU01G156200.1	Wheat	plasma membrane	50.14	28.03
Os01t0117700-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	51.28	27.99
TraesCS3B01G030500.1	Wheat	plasma membrane	51.0	27.93
Zm00001d008457_P001	Maize	plasma membrane	49.0	27.83
TraesCS2D01G530900.1	Wheat	plasma membrane	49.86	27.69
Os01t0113500-01	Rice	plasma membrane	50.14	27.67
TraesCS5D01G396800.1	Wheat	plasma membrane	51.28	27.23
PGSC0003DMT400003225	Potato	plasma membrane	41.6	27.19
PGSC0003DMT400015387	Potato	cytosol, plastid	42.17	27.16
EES00429	Sorghum	plasma membrane	51.0	27.08
HORVU1Hr1G002470.1	Barley	plasma membrane	44.16	26.82
HORVU3Hr1G002080.1	Barley	plastid	49.86	26.8
PGSC0003DMT400037780	Potato	plasma membrane	47.86	26.79
HORVU3Hr1G002550.4	Barley	plasma membrane	49.86	26.72
TraesCS2B01G558600.1	Wheat	plasma membrane	48.72	26.59
TraesCS3D01G063000.1	Wheat	plasma membrane	41.31	26.41
PGSC0003DMT400078557	Potato	plasma membrane	47.29	25.66
TraesCS5B01G391900.1	Wheat	cytosol	52.14	25.42
PGSC0003DMT400040940	Potato	plasma membrane	47.58	24.34
PGSC0003DMT400067848	Potato	plasma membrane	45.3	24.27
TraesCS1D01G018000.1	Wheat	plasma membrane	36.75	23.58
TraesCS3D01G014200.1	Wheat	plasma membrane	32.48	23.41
HORVU5Hr1G094870.2	Barley	cytosol	50.71	23.36
TraesCS5D01G527600.1	Wheat	plasma membrane	23.93	18.1
Os01t0113200-01	Rice	mitochondrion, plasma membrane	17.38	15.33
PGSC0003DMT400003215	Potato	plasma membrane	47.29	13.28
Os01t0113300-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BRV0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400020016	PGSC:PGSC0003DMG400020016
EnsemblPlants:PGSC0003DMT400051525	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27009
PANTHER:PTHR27009:SF32	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296C09D	SEG:seg	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400020016]

Coordinates

chr00:-:33975237..33977638

Molecular Weight (calculated)

39801.7 Da

IEP (calculated)

6.191

GRAVY (calculated)

-0.298

Length

351 amino acids

Sequence
(BLAST)

001: MAFYECYSSS KIERENQARV EKFLEDYRDR RPTRYTYADI KKITNQFQEI LGEGAYGIVY KGTLSNEIHV AVKILNDSEG NGEEFINEVA AMGKIHHVNV
101: VRLVGFCADG VRRALVFEYL PNQSLDKLIF PSSFKDNITL TWKKLHDIAM GIAKGLEYLH QGCDQQILHF DIKPQNILLD HNLNPKISDF GLAKLCSKEK
201: SVVTMTEARG TMGYIAPEVL SSNFGKASHK SDVYSFGMML LEMVGGRKNF DAKADTSQMN FPEWIHQRLN QGEELKIRIE EDDDVIIVRK LAVIGLWCIQ
301: WNATDRPSIK IVTQMLEGDV SNLTVPSPFT TRNTTHVGPS TQELTVISEL E

Best Arabidopsis Sequence Match ( AT1G66920.1 )
(BLAST)

001: MYYLPSSCLV LFLFFSLFYH LPCASSKQTL GWCESQFQCG NITAGFPFWG GNRPEVCGHP LLELHCLDNI TSLTISDHLY HVLSINHTYN TLRVARTDFL
101: QSICLSPFPF ANATLPPEIF DILPTYKSVT LYRCYPVIPD LARYGCPAIG SVSVSDNLEN PVSCEARFTV NIPTSFVPNE KRLNITSLVR DVRNGFEVRL
201: RIDENSCQEC SSSHKYCGFT GTLPLETKCR PLNLPTPTIA GVSLLPFLVL TLVVHIIRKQ KTSNDKGQQD LKEHIPKPRI KALIQLKQYS YEQVKRITNS
301: FAEVVGRGGF GIVYRGTLSD GRMVAVKVLK DLKGNNGEDF INEVASMSQT SHVNIVTLLG FCSEGYKRAI IYEFMENGSL DKFISSKKSS TMDWRELYGI
401: ALGVARGLEY LHHGCRTRIV HFDIKPQNVL LDDNLSPKVS DFGLAKLCER KESILSLMDT RGTIGYIAPE VFSRVYGSVS HKSDVYSYGM LVLDIIGARN
501: KTSTEDTTSS TSSMYFPEWI YKDLEKGDNG RLIVNRSEED EIAKKMTLVG LWCIQPWPLD RPAMNRVVEM MEGNLDALEV PPRPVLQCSV VPHLDSSWIS
601: EENSISSEI

Arabidopsis Description

LRK10L-2.4LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Source:UniProtKB/Swiss-Prot;Acc:F4HQ22]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.