Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g083760.2.1 | Tomato | nucleus | 96.07 | 56.79 |
| TraesCSU01G137800.1 | Wheat | nucleus | 36.54 | 44.6 |
| CDX92067 | Canola | nucleus | 38.11 | 41.1 |
| AT3G04380.1 | Thale cress | nucleus | 39.29 | 40.65 |
| Zm00001d051126_P004 | Maize | nucleus | 40.27 | 40.43 |
| KRG97025 | Soybean | nucleus | 19.84 | 35.56 |
| CDY49341 | Canola | nucleus | 38.9 | 35.55 |
| TraesCS2A01G478800.1 | Wheat | nucleus | 41.45 | 35.17 |
| TraesCS2D01G478100.1 | Wheat | nucleus | 41.06 | 34.95 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 40.86 | 34.61 |
| GSMUA_Achr1P20340_001 | Banana | nucleus | 47.94 | 34.37 |
| HORVU7Hr1G064110.6 | Barley | nucleus, plastid | 39.49 | 33.06 |
| KRH34133 | Soybean | nucleus | 43.42 | 32.22 |
| KRH68776 | Soybean | nucleus | 42.83 | 32.2 |
| OQU85329 | Sorghum | nucleus | 42.44 | 31.86 |
| KRG92731 | Soybean | nucleus | 43.81 | 31.28 |
| VIT_07s0005g04190.t01 | Wine grape | mitochondrion, nucleus | 51.87 | 31.13 |
| Os02t0621100-01 | Rice | nucleus | 44.99 | 30.9 |
| PGSC0003DMT400044180 | Potato | nucleus | 46.37 | 30.61 |
| TraesCS2D01G378500.3 | Wheat | nucleus | 40.67 | 30.53 |
| TraesCS2A01G382000.5 | Wheat | nucleus | 40.47 | 30.43 |
| TraesCS2B01G399300.4 | Wheat | nucleus | 40.47 | 30.43 |
| Bra036004.1-P | Field mustard | nucleus | 36.94 | 30.08 |
| KRG95723 | Soybean | nucleus | 42.63 | 29.97 |
| CDY14903 | Canola | nucleus | 37.13 | 29.53 |
| TraesCS6A01G226600.1 | Wheat | nucleus | 38.51 | 28.78 |
| TraesCS6D01G208400.1 | Wheat | nucleus | 38.51 | 28.78 |
| EES15150 | Sorghum | nucleus | 41.45 | 28.55 |
| TraesCS6B01G255000.1 | Wheat | nucleus | 38.11 | 28.49 |
| HORVU2Hr1G107560.8 | Barley | mitochondrion, nucleus | 40.47 | 28.34 |
| Zm00001d049884_P006 | Maize | nucleus | 40.86 | 27.99 |
| HORVU2Hr1G127770.1 | Barley | nucleus | 38.7 | 27.86 |
| HORVU2Hr1G127700.1 | Barley | nucleus | 38.7 | 27.86 |
| TraesCS2D01G477200.1 | Wheat | mitochondrion, nucleus | 40.08 | 27.64 |
| KRH32246 | Soybean | nucleus | 44.4 | 27.53 |
| Zm00001d031851_P002 | Maize | nucleus | 40.27 | 27.52 |
| TraesCS2B01G616200.1 | Wheat | nucleus | 39.49 | 27.27 |
| TraesCS2D01G566400.1 | Wheat | nucleus | 39.29 | 27.14 |
| KRH19618 | Soybean | nucleus | 43.81 | 27.13 |
| TraesCS2A01G478000.1 | Wheat | mitochondrion, nucleus | 39.69 | 27.11 |
| EES13161 | Sorghum | nucleus | 41.85 | 27.03 |
| CDX94744 | Canola | nucleus | 36.35 | 27.01 |
| TraesCS2B01G501300.2 | Wheat | mitochondrion, nucleus | 39.1 | 26.89 |
| AT5G43990.9 | Thale cress | nucleus | 39.1 | 26.89 |
| AT1G04050.1 | Thale cress | nucleus | 38.31 | 26.57 |
| CDY22319 | Canola | nucleus | 36.74 | 26.52 |
| Bra001104.1-P | Field mustard | nucleus | 38.31 | 25.79 |
| Bra033710.1-P | Field mustard | nucleus | 37.33 | 25.33 |
| PGSC0003DMT400046255 | Potato | cytosol | 15.91 | 24.7 |
| HORVU6Hr1G057990.5 | Barley | nucleus | 38.31 | 24.16 |
| CDX96935 | Canola | nucleus | 37.13 | 24.11 |
| CDY42922 | Canola | plasma membrane, vacuole | 39.1 | 24.03 |
| Zm00001d002938_P001 | Maize | nucleus | 33.01 | 23.63 |
| Bra040197.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 38.9 | 21.02 |
| PGSC0003DMT400054167 | Potato | nucleus | 17.09 | 18.05 |
| PGSC0003DMT400077329 | Potato | nucleus | 19.06 | 14.46 |
| PGSC0003DMT400080404 | Potato | nucleus, plastid | 16.5 | 13.75 |
| PGSC0003DMT400018512 | Potato | nucleus | 18.07 | 12.81 |
| PGSC0003DMT400075191 | Potato | nucleus | 16.11 | 12.42 |
| PGSC0003DMT400003956 | Potato | nucleus | 16.11 | 11.78 |
| PGSC0003DMT400054163 | Potato | extracellular, nucleus | 17.88 | 10.83 |
| PGSC0003DMT400054154 | Potato | nucleus | 17.88 | 10.73 |
| PGSC0003DMT400080391 | Potato | nucleus | 9.43 | 10.69 |
| PGSC0003DMT400080398 | Potato | nucleus | 17.29 | 10.0 |
| PGSC0003DMT400068351 | Potato | nucleus | 18.27 | 8.74 |
| PGSC0003DMT400067504 | Potato | nucleus | 17.68 | 8.52 |
| PGSC0003DMT400092528 | Potato | cytosol | 1.18 | 2.8 |
| CDY42923 | Canola | mitochondrion | 0.2 | 0.71 |
| CDX92068 | Canola | mitochondrion | 0.2 | 0.71 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.170.270.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR007728 |
| InterPro:IPR025776 | UniProt:M1BSG6 | PFAM:PF00856 | PFAM:PF05033 | EnsemblPlantsGene:PGSC0003DMG400020151 | PGSC:PGSC0003DMG400020151 |
| EnsemblPlants:PGSC0003DMT400051920 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS51580 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF460 |
| InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00468 | SUPFAM:SSF82199 | InterPro:SUVR4/1/2 |
| UniParc:UPI0002951EF6 | SEG:seg | : | : | : | : |
Description
SET domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020151]
Coordinates
chr6:+:58651024..58655467
Molecular Weight (calculated)
56946.6 Da
IEP (calculated)
4.612
GRAVY (calculated)
-0.535
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDMCECFLE LGTQYNHELQ ETAKVDAEND IGYRSMAPVS PNGSINLELD SGEDQPEKSQ LPLPCNGHTN STQTDQTTSA GNCGSIPEID QNIFEHLMSE
101: SPVALCGSKN LELDAGEAQP EKPQLPPCNS HNNSASTDQI ASVENCGSAP VIDQNILEHV TSQSPGPLCE STQDETGSCV VTDITRGQEE VMISLVNEVN
201: DKIPPSFNYI AHNVVFQNAY LNFSLARIGD DNSCSTCSGD CLSLSTPCAC AYETGGDFAY TKEGLVKEEL LKESISMNRD PKKHCQFFCK ECPLERSKNE
301: DIIEPCKGHL VRNFIKECWW KCRCDKQCGN RVVQRGISRK LQVFMTPDGK GWGLRTLEDL PRGAFICEYV GEVLTNAELF DRVSQSPNRE EHSYPVLLDA
401: DWGSEGVLKD EDALCLDATF FGNVARFINH RCFDSNMVEI PVEIETPDHH YYHLAFFTTR KVKALEELTW DYGIDFDDHE HPVKAFKCQC GSKFCRNMKR
501: PRSKCYSRA
101: SPVALCGSKN LELDAGEAQP EKPQLPPCNS HNNSASTDQI ASVENCGSAP VIDQNILEHV TSQSPGPLCE STQDETGSCV VTDITRGQEE VMISLVNEVN
201: DKIPPSFNYI AHNVVFQNAY LNFSLARIGD DNSCSTCSGD CLSLSTPCAC AYETGGDFAY TKEGLVKEEL LKESISMNRD PKKHCQFFCK ECPLERSKNE
301: DIIEPCKGHL VRNFIKECWW KCRCDKQCGN RVVQRGISRK LQVFMTPDGK GWGLRTLEDL PRGAFICEYV GEVLTNAELF DRVSQSPNRE EHSYPVLLDA
401: DWGSEGVLKD EDALCLDATF FGNVARFINH RCFDSNMVEI PVEIETPDHH YYHLAFFTTR KVKALEELTW DYGIDFDDHE HPVKAFKCQC GSKFCRNMKR
501: PRSKCYSRA
001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGSSIQVVQK
101: QPQLSNGDRK RKYKSRIADI TKGSESVKIP LVDDVGSEAV PKFTYIPHNI VYQSAYLHVS LARISDEDCC ANCKGNCLSA DFPCTCARET SGEYAYTKEG
201: LLKEKFLDTC LKMKKEPDSF PKVYCKDCPL ERDHDKGTYG KCDGHLIRKF IKECWRKCGC DMQCGNRVVQ RGIRCQLQVY FTQEGKGWGL RTLQDLPKGT
301: FICEYIGEIL TNTELYDRNV RSSSERHTYP VTLDADWGSE KDLKDEEALC LDATICGNVA RFINHRCEDA NMIDIPIEIE TPDRHYYHIA FFTLRDVKAM
401: DELTWDYMID FNDKSHPVKA FRCCCGSESC RDRKIKGSQG KSIERRKIVS AKKQQGSKEV SKKRK
101: QPQLSNGDRK RKYKSRIADI TKGSESVKIP LVDDVGSEAV PKFTYIPHNI VYQSAYLHVS LARISDEDCC ANCKGNCLSA DFPCTCARET SGEYAYTKEG
201: LLKEKFLDTC LKMKKEPDSF PKVYCKDCPL ERDHDKGTYG KCDGHLIRKF IKECWRKCGC DMQCGNRVVQ RGIRCQLQVY FTQEGKGWGL RTLQDLPKGT
301: FICEYIGEIL TNTELYDRNV RSSSERHTYP VTLDADWGSE KDLKDEEALC LDATICGNVA RFINHRCEDA NMIDIPIEIE TPDRHYYHIA FFTLRDVKAM
401: DELTWDYMID FNDKSHPVKA FRCCCGSESC RDRKIKGSQG KSIERRKIVS AKKQQGSKEV SKKRK
Arabidopsis Description
SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.