Factsheet for PGSC0003DMT400073845

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g006170.1.1	Tomato	nucleus	95.09	95.53
PGSC0003DMT400079004	Potato	cytosol	41.72	53.23
CDY31322	Canola	cytosol	24.23	42.36
Bra031921.1-P	Field mustard	cytosol	23.77	42.01
KRH42098	Soybean	nucleus	28.37	40.66
VIT_03s0017g00300.t01	Wine grape	nucleus	29.91	40.12
AT5G09540.1	Thale cress	nucleus	16.56	38.57
PGSC0003DMT400083794	Potato	nucleus	43.71	38.36
KRH49811	Soybean	nucleus	27.45	38.0
AT5G64360.7	Thale cress	nucleus	26.38	37.07
CDY69792	Canola	cytosol	16.41	36.52
Bra009389.1-P	Field mustard	cytosol	16.41	36.52
KRH10601	Soybean	nucleus	26.84	35.21
Bra024289.1-P	Field mustard	nucleus	24.69	35.08
KRH21766	Soybean	nucleus	26.69	34.87
CDX84519	Canola	nucleus	25.31	34.74
CDY21586	Canola	cytosol	15.34	34.6
CDY58269	Canola	nucleus	25.15	32.67
PGSC0003DMT400024179	Potato	cytosol	17.02	29.76
CDY46799	Canola	nucleus	17.02	28.32
GSMUA_Achr3P06790_001	Banana	cytosol	13.8	27.69
Zm00001d047214_P001	Maize	extracellular	16.56	27.2
HORVU4Hr1G039650.1	Barley	nucleus	16.56	27.14
GSMUA_Achr1P21390_001	Banana	cytosol	16.72	27.05
EER92178	Sorghum	nucleus	16.72	27.05
TraesCS4D01G156000.1	Wheat	nucleus	16.56	26.93
GSMUA_Achr10P...	Banana	cytosol	17.18	26.6
TraesCS4B01G160100.1	Wheat	cytosol	16.26	26.43
Os03t0392400-01	Rice	nucleus	16.41	26.42
TraesCS4A01G160900.1	Wheat	cytosol	16.1	26.25
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	15.8	26.01
PGSC0003DMT400092251	Potato	cytosol	14.26	25.76
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	15.03	24.75
Os09t0463700-01	Rice	nucleus	14.11	24.73
KXG35797	Sorghum	nucleus	14.26	24.22
EES14021	Sorghum	nucleus	15.8	23.3
TraesCS2A01G165100.1	Wheat	cytosol	13.96	23.27
TraesCS2D01G172200.1	Wheat	cytosol	13.96	23.27
TraesCS2B01G191300.1	Wheat	cytosol	13.96	23.21
HORVU2Hr1G030250.2	Barley	cytosol	13.8	23.14
Zm00001d020762_P001	Maize	nucleus	15.34	22.73
KXG36712	Sorghum	cytosol	14.88	22.3
Zm00001d047043_P001	Maize	nucleus	14.72	22.17
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	14.72	21.72
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	9.82	21.62
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	15.34	18.98
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	15.34	18.94
TraesCS5B01G242900.1	Wheat	cytosol	15.18	18.79
HORVU5Hr1G069570.1	Barley	nucleus	15.18	18.13
Bra027007.1-P	Field mustard	nucleus	18.4	16.09
CDY45966	Canola	nucleus	18.25	15.99
CDY45473	Canola	nucleus	18.25	15.91
PGSC0003DMT400041631	Potato	cytosol, mitochondrion, nucleus, plastid	8.28	15.84
AT1G62970.1	Thale cress	nucleus	17.79	14.55

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:107061266	MapMan:12.5.1.16.2	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M1CSS1	PFAM:PF00226	EnsemblPlantsGene:PGSC0003DMG400028693	PGSC:PGSC0003DMG400028693
EnsemblPlants:PGSC0003DMT400073845	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR45496	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0002950C1D	RefSeq:XP_015165726.1	SEG:seg	:	:	:

Description

Dnajc14 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028693]

Coordinates

chr11:+:6513122..6515348

Molecular Weight (calculated)

72018.3 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.647

Length

652 amino acids

Sequence
(BLAST)

001: MEHPFFINNG PPTNRSEALR FLSIAEKLLT NRDLVGSKSF ATRARDADPT FAPATDQVLG IVDTLNAGDK RINNHHFDYY SILQIPHNQT QNVDFIAEQY
101: RRFALLLNPQ NNSFPFSDQA FRLVVDAFSV LSNPMRKSMY DKELGFFLNL YPVAASTAPT SNFVHQNVYQ SMPSSNADQM FVNLPSQDAA GVSFSRDPQA
201: GISMPPTFLT REQETVTSME SSDIEQQQQQ PQQPVTFLRQ QTQPVTSISF SNTDEKPATF LSLNQPQPVT SVRSLNRENP PVGVRLSSTQ GREPVVTVEQ
301: HGNQQLPERN ENVVGNNANK SASTSDDVKE KEGNVDGSGK RIPSFWTACP YCLIMYEYSL DYANCNLRCQ NCKKGFQAVK IASPPPNIDG KEINFCCWGF
401: MPFGLSLEDF NRNIDNTSSW SPFSPMFTSP QFGGDGGSNV NSHAIGGQIN VNNLGSSLNA GGSISGDGRK HFAPTIYVED DDDDDDDVFV EVSKSVEESD
501: GDWNRSKERK KANNVKKKNA RTGTPRKNAK KQHTDKAKTV EGNNDGNLQD GLATQGGVEI SHAVTVESSN RGVTSKTRRQ RGRVAKHFGN LDLNVEFSNE
601: VEEPIIQMSR ENEAGEGEDD TVEVIGFFEG LDEFLSSLPI LNAVDGDKVE AA

Best Arabidopsis Sequence Match ( AT5G64360.4 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.