Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400073845 | |
| PGSC0003DMT400079004 | |
| PGSC0003DMT400083794 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | PGSC0003DMT400073845 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | PGSC0003DMT400079004 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | PGSC0003DMT400083794 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g082050.2.1 | Tomato | nucleus | 93.0 | 96.45 |
| PGSC0003DMT400018512 | Potato | nucleus | 74.81 | 69.92 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 61.85 | 56.31 |
| KRH66648 | Soybean | nucleus | 56.78 | 53.81 |
| KRG95012 | Soybean | plastid | 36.81 | 50.61 |
| Bra009408.1-P | Field mustard | nucleus | 38.0 | 49.8 |
| Bra005829.1-P | Field mustard | nucleus | 47.69 | 49.61 |
| Bra028776.1-P | Field mustard | nucleus | 45.16 | 47.72 |
| AT5G04940.2 | Thale cress | nucleus | 47.24 | 47.31 |
| AT1G73100.1 | Thale cress | nucleus | 47.09 | 47.23 |
| Bra009409.1-P | Field mustard | nucleus | 46.5 | 46.92 |
| Bra016018.1-P | Field mustard | nucleus | 46.8 | 46.38 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 39.49 | 42.88 |
| Os05t0490700-01 | Rice | extracellular | 42.92 | 42.86 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 42.62 | 42.43 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 42.62 | 42.31 |
| EES19725 | Sorghum | nucleus | 42.47 | 42.28 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 42.47 | 42.16 |
| Os12t0128450-00 | Rice | nucleus | 38.45 | 42.02 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 42.18 | 41.99 |
| Zm00001d010646_P001 | Maize | plastid | 40.69 | 41.87 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 42.03 | 41.84 |
| Os11t0131600-00 | Rice | nucleus | 41.28 | 41.72 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 41.43 | 41.25 |
| Zm00001d038541_P002 | Maize | nucleus | 42.47 | 41.19 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 42.92 | 39.72 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 39.34 | 38.71 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 39.49 | 38.52 |
| EES01635 | Sorghum | nucleus | 42.18 | 38.14 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 41.73 | 38.04 |
| Zm00001d041005_P001 | Maize | nucleus | 39.34 | 37.77 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 41.73 | 37.58 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 41.58 | 37.55 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 41.58 | 37.55 |
| Os11t0602200-01 | Rice | nucleus | 45.31 | 37.39 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 39.49 | 37.32 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 45.16 | 37.0 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 40.54 | 36.61 |
| EER96081 | Sorghum | nucleus | 45.16 | 36.51 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 45.31 | 36.45 |
| OQU78645 | Sorghum | nucleus | 40.09 | 36.06 |
| Zm00001d019195_P001 | Maize | nucleus | 45.6 | 35.75 |
| EES10399 | Sorghum | nucleus | 43.52 | 35.65 |
| Zm00001d043135_P003 | Maize | nucleus | 41.28 | 35.56 |
| TraesCS3A01G385200.1 | Wheat | plastid | 38.3 | 35.4 |
| PGSC0003DMT400054167 | Potato | nucleus | 25.34 | 35.27 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 43.22 | 34.81 |
| TraesCS3D01G378200.1 | Wheat | plastid | 34.43 | 33.72 |
| PGSC0003DMT400092528 | Potato | cytosol | 10.13 | 31.78 |
| PGSC0003DMT400075191 | Potato | nucleus | 30.7 | 31.21 |
| PGSC0003DMT400003956 | Potato | nucleus | 30.7 | 29.6 |
| PGSC0003DMT400080391 | Potato | nucleus | 19.52 | 29.18 |
| PGSC0003DMT400080404 | Potato | nucleus, plastid | 25.93 | 28.48 |
| PGSC0003DMT400046255 | Potato | cytosol | 12.07 | 24.7 |
| PGSC0003DMT400054154 | Potato | nucleus | 28.17 | 22.29 |
| PGSC0003DMT400054163 | Potato | extracellular, nucleus | 26.68 | 21.31 |
| PGSC0003DMT400080398 | Potato | nucleus | 27.87 | 21.25 |
| PGSC0003DMT400068351 | Potato | nucleus | 31.45 | 19.83 |
| PGSC0003DMT400067504 | Potato | nucleus | 30.85 | 19.6 |
| PGSC0003DMT400051920 | Potato | nucleus | 14.46 | 19.06 |
| PGSC0003DMT400044180 | Potato | nucleus | 16.54 | 14.4 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | EntrezGene:102579046 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 |
| InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 | UniProt:M1CY80 |
| PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 | EnsemblPlantsGene:PGSC0003DMG400030077 | PGSC:PGSC0003DMG400030077 | EnsemblPlants:PGSC0003DMT400077329 |
| PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF479 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 |
| SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 |
| UniParc:UPI000294DE7E | RefSeq:XP_006360793.1 | SEG:seg | : | : | : |
Description
Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:PGSC_GENE;Acc:PGSC0003DMG400030077]
Coordinates
chr9:-:53706835..53709531
Molecular Weight (calculated)
74424.2 Da
IEP (calculated)
8.418
GRAVY (calculated)
-0.435
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGFGSDPS GSTIDKTRVL DVKPLRCLSP VFPSASEMSS ITTPQPSPFV CITPTGPFPA GVTPIFPFLT PDESGRMGES SQQTPNRMPN QGTFGFGQPI
101: SPIPVNSFGN PITNGNSGHV NNVGDSGSGK KKGGPKKPRK VPPENVVEVD VEPLLNQLLM SFKLVELDQA KKADGDKEVV RRILLVFDLF RRRMTQIDEP
201: RYGAGSGRRP DLKASKMMMT KGMRTNQTKR IGNVPGIEVG DIFFFRMELC VVGLHAPTMS GIDYMSVKLT KDEEPLAVSI VSSGGYDDDG GDGDLLIYTG
301: QGGVQRKDGQ MFDQKLEKGN LALEKSVHRA NDVRVIRGVK DVANPTGKIY IFDGLYKIQG SWEEKNKSGC NVFKYKLLRV PGQPEAFKVW RSIQQWRDGV
401: VSRVGVILPD LTSGAESQAV CLVNDVDDEK GPAYFTYIPS LKYSKPFLTP RPSLGCQCLG GCQPDDTNCP CIQRNQGLLP YSSLGVLMTY KNLIHECGSA
501: CSCPPNCRNR MSQGGPKVRM EVFKTKNKGW GLRSWDPIRG GCFICEYAGE VSDLGYDRDD NYIFDATRIY EPLEAVHDYN DESRKVPFPL VISAKNGGNI
601: ARFMNHSCSP NVYWQLVVRE SNNEAYYHIA FFAIRHIPPL QELTFDYGMD KADHRRKKCL CGSFKCRGYF Y
101: SPIPVNSFGN PITNGNSGHV NNVGDSGSGK KKGGPKKPRK VPPENVVEVD VEPLLNQLLM SFKLVELDQA KKADGDKEVV RRILLVFDLF RRRMTQIDEP
201: RYGAGSGRRP DLKASKMMMT KGMRTNQTKR IGNVPGIEVG DIFFFRMELC VVGLHAPTMS GIDYMSVKLT KDEEPLAVSI VSSGGYDDDG GDGDLLIYTG
301: QGGVQRKDGQ MFDQKLEKGN LALEKSVHRA NDVRVIRGVK DVANPTGKIY IFDGLYKIQG SWEEKNKSGC NVFKYKLLRV PGQPEAFKVW RSIQQWRDGV
401: VSRVGVILPD LTSGAESQAV CLVNDVDDEK GPAYFTYIPS LKYSKPFLTP RPSLGCQCLG GCQPDDTNCP CIQRNQGLLP YSSLGVLMTY KNLIHECGSA
501: CSCPPNCRNR MSQGGPKVRM EVFKTKNKGW GLRSWDPIRG GCFICEYAGE VSDLGYDRDD NYIFDATRIY EPLEAVHDYN DESRKVPFPL VISAKNGGNI
601: ARFMNHSCSP NVYWQLVVRE SNNEAYYHIA FFAIRHIPPL QELTFDYGMD KADHRRKKCL CGSFKCRGYF Y
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.