Factsheet for PGSC0003DMT400079004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007230.2.1	Tomato	nucleus	61.45	73.71
PGSC0003DMT400073845	Potato	cytosol	53.23	41.72
Bra009389.1-P	Field mustard	cytosol	23.48	40.96
CDY69792	Canola	cytosol	23.48	40.96
CDY21586	Canola	cytosol	22.11	39.1
AT5G09540.1	Thale cress	nucleus	21.33	38.93
CDY31322	Canola	cytosol	24.66	33.78
Bra031921.1-P	Field mustard	cytosol	24.27	33.6
PGSC0003DMT400024179	Potato	cytosol	23.09	31.64
KRH42098	Soybean	nucleus	26.42	29.67
GSMUA_Achr3P06790_001	Banana	cytosol	18.59	29.23
VIT_03s0017g00300.t01	Wine grape	nucleus	27.59	29.01
GSMUA_Achr10P...	Banana	cytosol	23.09	28.03
KRH49811	Soybean	nucleus	25.64	27.81
Zm00001d047214_P001	Maize	extracellular	21.14	27.2
PGSC0003DMT400083794	Potato	nucleus	39.53	27.19
HORVU4Hr1G039650.1	Barley	nucleus	20.94	26.88
TraesCS4D01G156000.1	Wheat	nucleus	20.94	26.68
TraesCS4B01G160100.1	Wheat	cytosol	20.94	26.68
Bra024289.1-P	Field mustard	nucleus	23.87	26.58
AT5G64360.7	Thale cress	nucleus	24.07	26.51
CDX84519	Canola	nucleus	24.46	26.32
TraesCS4A01G160900.1	Wheat	cytosol	20.55	26.25
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	20.16	26.01
KRH21766	Soybean	nucleus	25.24	25.85
EER92178	Sorghum	nucleus	20.16	25.56
KRH10601	Soybean	nucleus	24.85	25.55
Os03t0392400-01	Rice	nucleus	20.16	25.43
CDY58269	Canola	nucleus	24.07	24.5
GSMUA_Achr1P21390_001	Banana	cytosol	19.18	24.32
Os09t0463700-01	Rice	nucleus	17.61	24.19
PGSC0003DMT400092251	Potato	cytosol	16.83	23.82
KXG35797	Sorghum	nucleus	17.61	23.44
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	17.81	22.98
EES14021	Sorghum	nucleus	19.37	22.4
HORVU2Hr1G030250.2	Barley	cytosol	16.83	22.11
KXG36712	Sorghum	cytosol	18.59	21.84
TraesCS2B01G191300.1	Wheat	cytosol	16.44	21.43
Zm00001d047043_P001	Maize	nucleus	18.0	21.25
TraesCS2A01G165100.1	Wheat	cytosol	16.24	21.23
TraesCS2D01G172200.1	Wheat	cytosol	16.05	20.97
Zm00001d020762_P001	Maize	nucleus	18.0	20.91
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	18.0	20.81
CDY46799	Canola	nucleus	15.46	20.15
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	11.35	19.59
TraesCS5B01G242900.1	Wheat	cytosol	17.81	17.27
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	17.61	17.08
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	17.61	17.05
AT1G62970.1	Thale cress	nucleus	26.22	16.81
Bra027007.1-P	Field mustard	nucleus	24.46	16.76
CDY45966	Canola	nucleus	24.27	16.67
HORVU5Hr1G069570.1	Barley	nucleus	17.42	16.3
CDY45473	Canola	nucleus	23.68	16.18
PGSC0003DMT400041631	Potato	cytosol, mitochondrion, nucleus, plastid	9.98	14.96

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:102587973	MapMan:12.5.1.16.2	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	UniProt:M1D138	PFAM:PF00226	EnsemblPlantsGene:PGSC0003DMG400030748	PGSC:PGSC0003DMG400030748	EnsemblPlants:PGSC0003DMT400079004
PFscan:PS50076	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00029607CB	RefSeq:XP_006359521.1	SEG:seg

Description

Dnajc14 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030748]

Coordinates

chr7:+:3169849..3171977

Molecular Weight (calculated)

56818.7 Da

IEP (calculated)

5.003

GRAVY (calculated)

-0.623

Length

511 amino acids

Sequence
(BLAST)

001: MEHPFFINGP PTNRSEALRW LSIAEKLLTN RDLVGSKSFA TRARESDPSL AHPIDQILSI VDTLTAGDKR INNHHFDYYS ILQIPPNQTQ NFEFIADQYR
101: RFALLLNPQN NNFPFSDQAF GLVVDAFSVL SDPLRKSMYD KELGFFLNLY PVASAPTPVS FVQHGGFNQM PGSTADQLFV NMPSQDQGSH ATGVSYSRDP
201: QAGISMPVTF LNREQETMTM GSSGSEQEHQ QQQQQQQQPV TSLRQQTQQP VSSLSFSNID EQPATFLNLN QPQPVTSERS FNRENPPFGI GLSSTRGREP
301: EVTVEQHGNQ QPLERNENVV VGSNENRPAS TSNNASNVKE KESRVDASAK KIPSFWTACP YCYVMHEYPL DYVDCTLKCQ NCKRAFQAVK VAAPPIIDGK
401: EAYFCCWGFM PLGFSVEHFE RSRNNVSSWS PFSPMFTCPT SGANEGRNAK NHAVGGQSNV STFGNLHNAG GSRSRSGRKL SAPRIYSDDD DDDDDDDDVL
501: VDISEVLSGD A

Best Arabidopsis Sequence Match ( AT5G64360.1 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG KETYVRSNKK
301: HGVEEVQNVE SISSASNHAV SIASNAAAVG SSTGVMSKPG SYITRKRMGT GAKNLGRLDL NVEFSNEVEE PGVAGGGNAG NGIGSNREVD NMEGIGFFEG
401: LDEFLNSLPI LSVVGDDKIK AT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.